Query= MSMg01no189_g08.b1 MSMg01no189_g08.b1 CHROMAT_FILE:
MSMg01no189_g08.b1 PHD_FILE: MSMg01no189_g08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:05:22 2005
(320 letters)
>mm_chr13_5601077_5601796
Length = 720
Score = 611 bits (316), Expect = e-179
Identities = 316/316 (100%)
Strand = Plus / Minus
Query: 5 gaattcttgccgtggtatgaaactggacattgttgtatttatttgttgaactcatttaat 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 gaattcttgccgtggtatgaaactggacattgttgtatttatttgttgaactcatttaat 384
Query: 65 ttgtttgtaataaatttttcctaaatataacagtgttcttgatttttttaatcttttcat 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 ttgtttgtaataaatttttcctaaatataacagtgttcttgatttttttaatcttttcat 324
Query: 125 tattttgtaatctattctataaaaatatacttattagaaatgaagtattcaaattatgac 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 tattttgtaatctattctataaaaatatacttattagaaatgaagtattcaaattatgac 264
Query: 185 tacatagctctaaatgttacattttccagattgaatgatcattgtgatcaaaccaacagt 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 tacatagctctaaatgttacattttccagattgaatgatcattgtgatcaaaccaacagt 204
Query: 245 atattatataaattattattcatcaaataaaaactaaaatttaattagagatgtgagcca 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 203 atattatataaattattattcatcaaataaaaactaaaatttaattagagatgtgagcca 144
Query: 305 gggctctgttgttttg 320
||||||||||||||||
Sbjct: 143 gggctctgttgttttg 128
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 320
Length of database: 720
Length adjustment: 9
Effective length of query: 311
Effective length of database: 711
Effective search space: 221121
Effective search space used: 221121
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no189_g08.g1 MSMg01no189_g08.g1 CHROMAT_FILE:
MSMg01no189_g08.g1 PHD_FILE: MSMg01no189_g08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:05:22 2005
(286 letters)
>mm_chr13_5472461_5473146
Length = 686
Score = 549 bits (284), Expect = e-161
Identities = 284/284 (100%)
Strand = Plus / Plus
Query: 1 tcagctcttcctgcaccatgcttgcctggatgctgtcatgttcctgccttgatgatcatg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tcagctcttcctgcaccatgcttgcctggatgctgtcatgttcctgccttgatgatcatg 260
Query: 61 gactgaacctctgaacttgtaagccagccccaaataaatgttgtccttataagagttgcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gactgaacctctgaacttgtaagccagccccaaataaatgttgtccttataagagttgcc 320
Query: 121 ttggtcaagagtgtacctggagggatccatggctccagatacatgtgtagttcctaggac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttggtcaagagtgtacctggagggatccatggctccagatacatgtgtagttcctaggac 380
Query: 181 ctgaaaagtatattcaagtaaaacttaagtgaaggaatttcagtcaaaaaacatatgtat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ctgaaaagtatattcaagtaaaacttaagtgaaggaatttcagtcaaaaaacatatgtat 440
Query: 241 ccagttaatatttgtttaaatatctatggacatactctctttct 284
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ccagttaatatttgtttaaatatctatggacatactctctttct 484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 286
Length of database: 686
Length adjustment: 9
Effective length of query: 277
Effective length of database: 677
Effective search space: 187529
Effective search space used: 187529
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
