Query= MSMg01no192_n16.b1 MSMg01no192_n16.b1 CHROMAT_FILE:
MSMg01no192_n16.b1 PHD_FILE: MSMg01no192_n16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:10:49 2005
(351 letters)
>mm_chr13_20444908_20445657
Length = 750
Score = 609 bits (315), Expect = e-179
Identities = 339/347 (97%), Gaps = 1/347 (0%)
Strand = Plus / Plus
Query: 5 gaattctcatattgatttctagagtggataacttggattatccagagtagctgcactgat 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctcatattgatttctagagtggataacttggattatccagagtagctgcactgat 264
Query: 65 aaccttggtatttgggggcggagggtagaagatttatgtggaggcttcatccatgcttca 124
||||||||||||||||||||| |||||| ||||||||||||||| ||||||||| |||||
Sbjct: 265 aaccttggtatttgggggcggggggtag-agatttatgtggaggtttcatccatacttca 323
Query: 125 gatgaaccctacagttggtttttgttgttgttgttttggttttgctttttgtttttgccc 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 gatgaaccctacagttggtttttgttgttgttgttttggttttgctttttgtttttgccc 383
Query: 185 cactaacccaatattttctgaggaaaggcaattgatttgcccaggagcagtttatcctgc 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 cactaacccaatattttctgaggaaaggcaattgatttgcccaggagcagtttatcctgc 443
Query: 245 tgttaagcagtctcctggacttgttactctcttctgtttagctttgctttctatgtgtgc 304
||||||||||||||||||||| |||||||||||| ||||||||||||||||||||| |||
Sbjct: 444 tgttaagcagtctcctggactcgttactctcttccgtttagctttgctttctatgtctgc 503
Query: 305 atggtacttgatcacattggcggccattgataagaatcatctccagc 351
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 ttggtacttgatcacattggcggccattgataagaatcatctccagc 550
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 351
Length of database: 750
Length adjustment: 9
Effective length of query: 342
Effective length of database: 741
Effective search space: 253422
Effective search space used: 253422
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no192_n16.g1 MSMg01no192_n16.g1 CHROMAT_FILE:
MSMg01no192_n16.g1 PHD_FILE: MSMg01no192_n16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:10:49 2005
(376 letters)
>mm_chr13_20548284_20549059
Length = 776
Score = 656 bits (339), Expect = 0.0
Identities = 369/383 (96%), Gaps = 7/383 (1%)
Strand = Plus / Minus
Query: 1 aggtcacaggaacttgtta-------acacacagtccccaaagcacagttaatagaaggg 53
||||||||| ||||||||| |||||||||||||||| |||||||||||||||||
Sbjct: 602 aggtcacagaaacttgttaaccattcacacacagtccccaaaacacagttaatagaaggg 543
Query: 54 aaagaggcttcagatgtggatgaatagagcaatcagcttggtgagtagtgacgagtctcc 113
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 542 aaagaggcttcagatgtggatgaatagagcaatcagcttggtgagtagtgacgagtctcc 483
Query: 114 taagggatggtctgtaactgaaccaagggactgatggattgtgctgcggtggagcggaag 173
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 482 taagggatggtctgtaactgaaccaagggactgatggattgtgctgctgtggagcggaag 423
Query: 174 aacctgctaattgtttccttctcacatttgccaaatctggacacagcaaagaaagttata 233
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 aacctgctaattgtttccttctcacatttgccaaatctggacacagcaaagaaagttata 363
Query: 234 tgggcttggtcaaaacttcagaagtgagaactctatactagtcttgaattacaaagggat 293
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 tgggcttggtcaaaacttcagaagtgagaactctatactagtcttgaattacaaagggat 303
Query: 294 actgtctgaatatattagcattgtcaggcttgtctgttactgtttgtgaaactcatgaag 353
||||||||||| ||||||||||||||||||| |||| ||||||||||||||||||||||
Sbjct: 302 actgtctgaatctattagcattgtcaggcttatctgggactgtttgtgaaactcatgaag 243
Query: 354 ttttatactacacatgtccagtg 376
|||||||||||||||||||||||
Sbjct: 242 ttttatactacacatgtccagtg 220
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 376
Length of database: 776
Length adjustment: 9
Effective length of query: 367
Effective length of database: 767
Effective search space: 281489
Effective search space used: 281489
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
