Query= MSMg01no192_n23.b1 MSMg01no192_n23.b1 CHROMAT_FILE:
MSMg01no192_n23.b1 PHD_FILE: MSMg01no192_n23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:10:51 2005
(410 letters)
>mm_chr13_103346138_103346945
Length = 808
Score = 706 bits (365), Expect = 0.0
Identities = 393/403 (97%), Gaps = 2/403 (0%)
Strand = Plus / Plus
Query: 5 gaattcagccctacacatcccctacaaatagttcagtaaatccaggttcatcctgtgaca 64
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 205 gaattcagccctacacatcccctacaaatagttcagtaaatccaggttcatcctgtgata 264
Query: 65 tatagacattgatatagcctttgccttagaaatgggcacctatacatatcggccaactgc 124
||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 265 tatagacattgatatagcctttgccttagaaatgggc--ctatacatatcggccaactgc 322
Query: 125 agactcctcaaacacctatgacccatctgacccatctgacgttctcatctcctgcttctt 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 agactcctcaaacacctatgacccatctgacccatctgacgttctcatctcctgcttctt 382
Query: 185 ctggacttcacagtcccgggcaacatgattgctgtatctggggcaattttcagagatcca 244
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||
Sbjct: 383 ctggacttcacagtcccgggcaacatgactgctgtatctggggcaattttcagagagcca 442
Query: 245 ataaaaacacatacgctttcaagacatagtgccacctctgaatccaaaactcgtgtgact 304
|||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 443 ataaaaacgcatacgctttcaagacatagcgccacctctgaatccaaaactcgtgtgact 502
Query: 305 gttgaggagcaaagtgatctcttttctcttttcctagcataaacacacatggcttatgga 364
||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||
Sbjct: 503 gttgaggagcaaagtgatctcttttctcttttcctagcataaacacacatggcagaggga 562
Query: 365 cagtgccaaaggtcacagtgagatgagtttagaaactccttcc 407
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 cagtgccaaaggtcacagtgagatgagtttagaaactccttcc 605
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 410
Length of database: 808
Length adjustment: 9
Effective length of query: 401
Effective length of database: 799
Effective search space: 320399
Effective search space used: 320399
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no192_n23.g1 MSMg01no192_n23.g1 CHROMAT_FILE:
MSMg01no192_n23.g1 PHD_FILE: MSMg01no192_n23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:10:51 2005
(377 letters)
>mm_chr13_103473335_103474111
Length = 777
Score = 690 bits (357), Expect = 0.0
Identities = 369/373 (98%)
Strand = Plus / Minus
Query: 1 actctgtagagcaggctggcctcgaactcagaaatctgcctgcctctgcctcctgagtgc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 516 actctgtagagcaggctggcctcgaactcagaaatctgcctgcctctgcctcctgagtgc 457
Query: 61 tgggattaaaggtgtgcgccaccactgcccggctatgtgtatttctttactagttctcca 120
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 456 tgggattaaaggcgtgcgccaccactgcccggctatgtgtatttctttactagttctcca 397
Query: 121 tttcatttctattgcattttgttcctgaccatcctttccctgtaagacatgtctattgtg 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 396 tttcatttctattgcattttgttcctgaccatcctttccctgtaagacatgtctgttgtg 337
Query: 181 ttagcatccacctttgacttccaccagctctctctctttaaagtgtgttcaggagcttaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 336 ttagcatccacctttgacttccaccagctctctctctttaaagtgtgttcaggagcttaa 277
Query: 241 ggaggccagaggccttagatttctctagatttggagttataggtcattctgaacaactgc 300
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 276 ggaggccagaggccttagatttctctagatttggaattataggtcattctgaacaactgc 217
Query: 301 tgtggataatgggagctgagttaaaatctatgcaagaatagcaagtgctataaatggtga 360
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 216 tgtggatactgggagctgagttaaaatctatgcaagaatagcaagtgctataaatggtga 157
Query: 361 gccatctctccag 373
|||||||||||||
Sbjct: 156 gccatctctccag 144
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 377
Length of database: 777
Length adjustment: 9
Effective length of query: 368
Effective length of database: 768
Effective search space: 282624
Effective search space used: 282624
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
