Query= MSMg01no193_a17.b1 MSMg01no193_a17.b1 CHROMAT_FILE:
MSMg01no193_a17.b1 PHD_FILE: MSMg01no193_a17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:11:15 2005
(406 letters)
>mm_chr13_9427320_9428125
Length = 806
Score = 716 bits (370), Expect = 0.0
Identities = 376/378 (99%), Gaps = 1/378 (0%)
Strand = Plus / Minus
Query: 4 ggaattctcacaagacagaaaactgatttcaactcctgtgggattttataggaaaacttt 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 ggaattctcacaagacagaaaactgatttcaactcctgtgggattttataggaaaacttt 318
Query: 64 caattaaagtgccttgcacaaactttgtctaaaggaggactaattgaacaaagcatcaat 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 317 caattaaagtgccttgcacaaactttgtctaaaggaggactaattgaacaaagcatcaat 258
Query: 124 aaccagtcttaataccaaatggcttaagaagtcaccattggtctagctttttatgactgt 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 257 aaccagtcttaataccaaatggcttaagaagtcaccattggtctagctttttatgactgt 198
Query: 184 ggaaagaaatgatctctctctccaggatgtgagatgctgccaggaaagactgagtttttc 243
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 197 ggaaagaaatgatctttctctccaggatgtgagatgctgccaggaaagactgagtttttc 138
Query: 244 tgtgctgattcagagaacaactcaggaagttccaggaagccagcctttaagttacacata 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 137 tgtgctgattcagagaacaactcaggaagttccaggaagccagcctttaagttacacata 78
Query: 304 aagcagaacccaagagacggaaggaccaggccttaagctgcattactcttacagtccatc 363
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 77 aagcagaacccaagagacgg-aggaccaggccttaagctgcattactcttacagtccatc 19
Query: 364 tcagttctgcaggtgtca 381
||||||||||||||||||
Sbjct: 18 tcagttctgcaggtgtca 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 406
Length of database: 806
Length adjustment: 9
Effective length of query: 397
Effective length of database: 797
Effective search space: 316409
Effective search space used: 316409
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no193_a17.g1 MSMg01no193_a17.g1 CHROMAT_FILE:
MSMg01no193_a17.g1 PHD_FILE: MSMg01no193_a17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:11:15 2005
(376 letters)
>mm_chr13_9385491_9386266
Length = 776
Score = 704 bits (364), Expect = 0.0
Identities = 373/376 (99%)
Strand = Plus / Plus
Query: 1 attaaagtcaaattctcctggggactactcaggtaggatggcattctttggaacttcctg 60
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 201 attaaagtcaaattctcctggggactgctcaggtaggatggcattctttggaacttcctg 260
Query: 61 atcagcagagggatcctgggccagaatgtcttccaccctgtcctcttccacccctccatt 120
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 atcagcagagggaccctgggccagaatgtcttccaccctgtcctcttccacccctccatt 320
Query: 121 gctctgtcaccttgttctttttctccctttgtgatcctcttctagagtcttattatcagc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gctctgtcaccttgttctttttctccctttgtgatcctcttctagagtcttattatcagc 380
Query: 181 tctatgtttcggactgactggtaggtcccgctgaaaaccattctggttcttcctcagtgt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tctatgtttcggactgactggtaggtcccgctgaaaaccattctggttcttcctcagtgt 440
Query: 241 atgaatcgtttcttctatgcacaccaaagacacgtttactatctccaaactccctcctga 300
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 441 atgaatcgtttcttctatgctcaccaaagacacgtttactatctccaaactccctcctga 500
Query: 301 aatgcttgtccttgtagtccctctctctgtctccatctctcaagttgtgcaggtccttgt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aatgcttgtccttgtagtccctctctctgtctccatctctcaagttgtgcaggtccttgt 560
Query: 361 cactgagacagtgatc 376
||||||||||||||||
Sbjct: 561 cactgagacagtgatc 576
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 376
Length of database: 776
Length adjustment: 9
Effective length of query: 367
Effective length of database: 767
Effective search space: 281489
Effective search space used: 281489
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
