Query= MSMg01no199_m03.b1 MSMg01no199_m03.b1 CHROMAT_FILE:
MSMg01no199_m03.b1 PHD_FILE: MSMg01no199_m03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:20:26 2005
(318 letters)
>mm_chr13_48116951_48117668
Length = 718
Score = 600 bits (310), Expect = e-176
Identities = 313/314 (99%)
Strand = Plus / Minus
Query: 5 gaattccacatcttgttccaaagacaaacaggggaagactactgtcttccagtcagctaa 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 702 gaattccacatcttgttccaaagacaaacaggggaagactactgtcttccagtcagctaa 643
Query: 65 gagaagggtatctaagcccacttctacagtgacatacttcccccaacaatgccactccta 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 642 gagaagggtatctaagcccacttctacagtgacatacttcccccaacaatgccactccta 583
Query: 125 ctctaacaaggccacacctcctaatagtgccacttcctgggccaagcatattcaaaccac 184
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 582 ctctaacgaggccacacctcctaatagtgccacttcctgggccaagcatattcaaaccac 523
Query: 185 tacaatttatgcatattactaagctgtacactatgagtttaaagactacagtggagttca 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 522 tacaatttatgcatattactaagctgtacactatgagtttaaagactacagtggagttca 463
Query: 245 taagtcaacccagagttgttatggaggtatacatattccttttgtcattgctatgacaaa 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 462 taagtcaacccagagttgttatggaggtatacatattccttttgtcattgctatgacaaa 403
Query: 305 ctacctgacaaaga 318
||||||||||||||
Sbjct: 402 ctacctgacaaaga 389
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 318
Length of database: 718
Length adjustment: 9
Effective length of query: 309
Effective length of database: 709
Effective search space: 219081
Effective search space used: 219081
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no199_m03.g1 MSMg01no199_m03.g1 CHROMAT_FILE:
MSMg01no199_m03.g1 PHD_FILE: MSMg01no199_m03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:20:26 2005
(244 letters)
>mm_chr13_47965529_47966173
Length = 645
Score = 466 bits (241), Expect = e-136
Identities = 244/245 (99%), Gaps = 1/245 (0%)
Strand = Plus / Plus
Query: 1 ccaggcactcctggctgagggcgggtttagaagaatgggtgccaaatcccccctttcaca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ccaggcactcctggctgagggcgggtttagaagaatgggtgccaaatcccccctttcaca 260
Query: 61 agggggctctggggtacttagtgtcttatgccctcctcggtgccaggtcccagagagctg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agggggctctggggtacttagtgtcttatgccctcctcggtgccaggtcccagagagctg 320
Query: 121 ctggctcagtaggttccctgcttctctctggctcaagctcatcttctgtggatttcctgt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ctggctcagtaggttccctgcttctctctggctcaagctcatcttctgtggatttcctgt 380
Query: 181 ggtaatccctctccgtgtccctctgagaaacaaacagtaattgctaatttttttt-ccca 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 381 ggtaatccctctccgtgtccctctgagaaacaaacagtaattgctaatttttttttccca 440
Query: 240 caaga 244
|||||
Sbjct: 441 caaga 445
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 244
Length of database: 645
Length adjustment: 9
Effective length of query: 235
Effective length of database: 636
Effective search space: 149460
Effective search space used: 149460
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
