Query= MSMg01no201_o18.b1 MSMg01no201_o18.b1 CHROMAT_FILE:
MSMg01no201_o18.b1 PHD_FILE: MSMg01no201_o18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:22:31 2005
(606 letters)
>mm_chr13_45665345_45666350
Length = 1006
Score = 1125 bits (582), Expect = 0.0
Identities = 600/606 (99%), Gaps = 1/606 (0%)
Strand = Plus / Plus
Query: 1 aatgtctacctggcacagggtagactgccaagaacaccagtgtgaagcacggtagcagca 60
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 201 aatgtctacctggcacagggtagactgccaagaagaccagtgtgaagcacggtagcagca 260
Query: 61 ggagacacgagcactgcccacacggtgaagctgcagagggaaacaacatcaaaggctctg 120
||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ggagataggagcactgcccacacggtgaagctgcagagggaaacaacatcaaaggctctg 320
Query: 121 atctggggagctgcttttctggggttggaacttgaatgaatacatttcctcctcagattg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 atctggggagctgcttttctggggttggaacttgaatgaatacatttcctcctcagattg 380
Query: 181 tttttcctatgatctgactttagaacagaccctcaaactgggtgtggtcatgagtgtctg 240
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 381 tttttcctatgatctgactttagaacagaccctcaaactgggtgtggtcacgagtgtctg 440
Query: 241 taatctcagcccatgggaggctgaggcaggaaagttgagactttgtagaccagcctgctt 300
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 441 taatctcagcccatgggaggctgaggcaggaaagttgagactttgtagaccagc-tgctt 499
Query: 301 gggctacaaagaaagaccctgtctaaaggggcagaaaaagtaagcaagcaaacaggcaaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 gggctacaaagaaagaccctgtctaaaggggcagaaaaagtaagcaagcaaacaggcaaa 559
Query: 361 caaacaaagaaacacacaaacaaacaaaaaaaaaacaaatcaaaatgaaaactctaagcc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 caaacaaagaaacacacaaacaaacaaaaaaaaaacaaatcaaaatgaaaactctaagcc 619
Query: 421 cttaccaagcagaaccaaacgcatactgtaagctcccagtctttaacaattcaagctatg 480
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 620 cttaccaagcagaaccaaacgcatactgtaagctcccagtctttaacaattcaagcaatg 679
Query: 481 tccatgtagaaccaacagcaagatccacagtgcagcataatcctgtgctcagctcctcat 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 tccatgtagaaccaacagcaagatccacagtgcagcataatcctgtgctcagctcctcat 739
Query: 541 ccctgtatcacacaactccaaatggctctcatccagtttagtgtgtgtgtgtgtgtgtgt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 ccctgtatcacacaactccaaatggctctcatccagtttagtgtgtgtgtgtgtgtgtgt 799
Query: 601 gtgtgt 606
||||||
Sbjct: 800 gtgtgt 805
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 37
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 606
Length of database: 1006
Length adjustment: 10
Effective length of query: 596
Effective length of database: 996
Effective search space: 593616
Effective search space used: 593616
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no201_o18.g1 MSMg01no201_o18.g1 CHROMAT_FILE:
MSMg01no201_o18.g1 PHD_FILE: MSMg01no201_o18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:22:31 2005
(237 letters)
>mm_chr13_45723425_45724061
Length = 637
Score = 412 bits (213), Expect = e-120
Identities = 222/225 (98%)
Strand = Plus / Minus
Query: 1 aggagaaatgagaggagggcttccgacccagcccatctgcgaagtcagacaatggcttgc 60
||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 377 aggagaaatgagaggagggcttccgacccaggccatctgcgaagtcagacaatggcttgg 318
Query: 61 caatggcatttaaagccccaaaagcaagtggctgtgtggtccaggcatcttaagccagga 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 317 gaatggcatttaaagccccaaaagcaagtggctgtgtggtccaggcatcttaagccagga 258
Query: 121 aagaagggacttgtgaatgcagatagaggagaaaaacctggagccatacgcatacctgag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 257 aagaagggacttgtgaatgcagatagaggagaaaaacctggagccatacgcatacctgag 198
Query: 181 agagagagagagagagagagagagagagagagagagagagagaga 225
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 197 agagagagagagagagagagagagagagagagagagagagagaga 153
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 60
Number of extensions: 26
Number of successful extensions: 26
Number of sequences better than 10.0: 1
Number of HSP's gapped: 24
Number of HSP's successfully gapped: 1
Length of query: 237
Length of database: 637
Length adjustment: 9
Effective length of query: 228
Effective length of database: 628
Effective search space: 143184
Effective search space used: 143184
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
