Query= MSMg01no209_e02.b1 MSMg01no209_e02.b1 CHROMAT_FILE:
MSMg01no209_e02.b1 PHD_FILE: MSMg01no209_e02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:33:20 2005
(315 letters)
>mm_chr13_20091664_20092378
Length = 715
Score = 555 bits (287), Expect = e-162
Identities = 305/311 (98%)
Strand = Plus / Plus
Query: 5 gaattccatgatcaccatttaagtaggaataattctttctaacagaatttttcctgtggc 64
||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 205 gaattccatgatcacaatttaagtaggaataattctttctaacagattttttcctgtggc 264
Query: 65 aagagaaagcttccgtgaaatgagaaaataaataaattagcactaaaacatttatcttct 124
||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 265 aagagaaagcttcaatgaaatgagaaaataaataaattagcactaagacatttatcttct 324
Query: 125 tttcatttatttttatgggagtggatgttttgcttggtactacatatgtttgtttaccca 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tttcatttatttttatgggagtggatgttttgcttggtactacatatgtttgtttaccca 384
Query: 185 aagagaccagaagagggtgtcagatcccatgggaatgaaggtaattatgaattgctatat 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 aagagaccagaagagggtgtcagatcccatgggaatgaaggtaattatgaattgctatat 444
Query: 245 ggtaattgaaaaatcaaaccagggtcctctgaaagaatagtcagtgctctttaccactga 304
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 gggaattgaaaaatcaaaccagggtcctctgaaagaatagtcagtgctctttaccactga 504
Query: 305 gccatctctcc 315
|||||||||||
Sbjct: 505 gccatctctcc 515
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 315
Length of database: 715
Length adjustment: 9
Effective length of query: 306
Effective length of database: 706
Effective search space: 216036
Effective search space used: 216036
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no209_e02.g1 MSMg01no209_e02.g1 CHROMAT_FILE:
MSMg01no209_e02.g1 PHD_FILE: MSMg01no209_e02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:33:20 2005
(295 letters)
>mm_chr13_20245837_20246531
Length = 695
Score = 493 bits (255), Expect = e-144
Identities = 285/301 (94%), Gaps = 12/301 (3%)
Strand = Plus / Minus
Query: 1 cttctgaagggaatttcttcttagaaaagttttgtttctcctttt-aaatgtgttcagta 59
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 407 cttctgaagggaatttcttcttagaaaagttttgtttctccttttaaaatgtgttcagta 348
Query: 60 atcatagctggtaatctgcaagtttctgagtgcttataggaaatattttaagttgcatat 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 347 atcatagctggtaatctgcaagtttctgagtgcttataggaaatattttaagttgcatat 288
Query: 120 tagccttttctaccacttgagtgaattatgtatgtaagacacactccctacgtcccgcca 179
||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||
Sbjct: 287 tagccttttctaccacttgagtgaattatgtatgtaagacacactccctacatcccacca 228
Query: 180 tattcaacggaaacacttgcctttccttaaaaaagaaaaaaaggaaaaagaaaaaa---- 235
||||||| |||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 227 tattcaatggaaacacttgc-tttccttaaaaaagaaaaaaaggaaaaagaaaaaagaaa 169
Query: 236 ------aaattaccttctatttagaaaatactagttcaaaggttttttatatggaatttt 289
|||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 168 aaaagaaaattaccttctatttagaaaatattagttcaaaggttttttatatggaatttt 109
Query: 290 t 290
|
Sbjct: 108 t 108
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 295
Length of database: 695
Length adjustment: 9
Effective length of query: 286
Effective length of database: 686
Effective search space: 196196
Effective search space used: 196196
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
