TCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCCTGAGGTTATCAACACAGGGAGAACAAAAGGTTTCTTTTGTCTTG
GTTCTTGACAGCTCTAGTCCACAGTCAGGAGCAGTGTCCTCCACACAACC
ACCTGGCATTAGTGTTTTCTTGGACATTTTTACTGAAAGGCCTACTGGAA
AGAGTGTGTGGAATAATCTTAGATGTAGGACTTTTACAGGCAAAACTTCT
CACCTCTGGCCTGCTAGAGAAGTGAGGGAGACCCCAACCTTGTAACTTCT
TTCCTCGAGGTCACACCTTCAAATGTCCCTCTCACTTCCCAGTACTGGCA
CGTTCATTCTTTACCGCATGCCCTAAACTACAGTATAGGCTAATTCACTT
TTACAATATGTTACTTAATTTTGTGTGCCTTTACACACAAGTGGGGGTGT
GACCCAGCCATTCATGTAGAGTCAGGCAGGACAGCTTTGTGGGGTCCGTT
CCCCCTTTTACATTTATACGGGGGTCTAAGTATTGAGCATAGGTCGCCAA
GTTCTCACCACTGTGTGGCAGGTGGCTTTATCCATGGAGCCATCCCACTG
GCCCTTGTATTTTTTACAGCAGCTTTATGAGGTATGTGCATTTGCTGTGG
CCACTTAATCATGAGTCAGTATAGGCCTGGGAGGATTCTAG

TCATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTGTGCCATCATGCCCAGATT
TTTTTTATGAGGATGCAGGGAATTGGACTTGAGTCTTCACATTTGTGCGA
CACACATTTTATCTGAGCCAAATCCTCAGTCCCTTTTCTTTATCTCAATC
TATACATAAATTGTTACGTTTCTCAGTAGGAAACACACATGCGCGCACAC
ACACACACGCACACACACACTAGTGAAATGTTTCTGGCCCACAGGTCAGA
GAAGGGATTGTGAACACCCAAACTGTTCACTTGCTCTGTGAGTTTACCCA
CCCTGTCCTGGCAGGCGCCCTCTGTGGTAGAGGTCCTACATACTGCATAT
GTCCAATCTCCTTTTGGGAACCACTGTCTCTGCCTTTCACCACAAGAAAG
GGTACTTTTCAATTGCAGCTAATTTTCCTGAACACAGGTCCACAGACTAA
GTGCCCAGTCTCATGAGATGACTCTACCACAGACACCCTATGGAGCATGC
ACACTTCTGACCAGACTGTGACCCTGTGCTGCTCACATCCCTCTCTTTGG
TTTCAATGTCTTGCTGCCATGGATCACAGAGCCAAGAAGAAATGTTTTTA
GTGACACTGATGACAAAGAGCAAAATTACAAGTTAAAAAAA

Query= MSMg01no209_k14.b1 MSMg01no209_k14.b1 CHROMAT_FILE:
MSMg01no209_k14.b1 PHD_FILE: MSMg01no209_k14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:33:51 2005
         (618 letters)



>mm_chr13_51172872_51173889
          Length = 1018

 Score = 1118 bits (578), Expect = 0.0
 Identities = 605/614 (98%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattcctgaggttatcaacacagggagaacaaaaggtttcttttgtcttggttcttgac 64
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 617 gaattcctgaggttatcaacacagggagaacaaaaggtttcttttgtcttggttcttgac 558

                                                                       
Query: 65  agctctagtccacagtcaggagcagtgtcctccacacaaccacctggcattagtgttttc 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 557 agctctagtccacagtcaggagcagtgtcctccacacaaccacctggcattagtgttttc 498

                                                                       
Query: 125 ttggacatttttactgaaaggcctactggaaagagtgtgtggaataatcttagatgtagg 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 ttggacatttttactgaaaggcctactggaaagagtgtgtggaataatcttagatgtagg 438

                                                                       
Query: 185 acttttacaggcaaaacttctcacctctggcctgctagagaagtgagggagaccccaacc 244
           ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 437 acttttacaggcaaaacttctcacctctggcctgctagagaggtgagggagaccccaacc 378

                                                                       
Query: 245 ttgtaacttctttcctcgaggtcacaccttcaaatgtccctctcacttcccagtactggc 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 ttgtaacttctttcctcgaggtcacaccttcaaatgtccctctcacttcccagtactggc 318

                                                                       
Query: 305 acgttcattctttaccgcatgccctaaactacagtataggctaattcacttttacaatat 364
           ||| |||  |||||||  |||  ||||||||||||||| |||||||||||||||||||||
Sbjct: 317 acgctcagcctttaccatatgggctaaactacagtataagctaattcacttttacaatat 258

                                                                       
Query: 365 gttacttaattttgtgtgcctttacacacaagtgggggtgtgacccagccattcatgtag 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 257 gttacttaattttgtgtgcctttacacacaagtgggggtgtgacccagccattcatgtag 198

                                                                       
Query: 425 agtcaggcaggacagctttgtggggtccgttcccccttttacatttatacgggggtctaa 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 197 agtcaggcaggacagctttgtggggtccgttcccccttttacatttatacgggggtctaa 138

                                                                       
Query: 485 gtattgagcataggtcgccaagttctcaccactgtgtggcaggtggctttatccatggag 544
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 137 gtattgagcataggtcgccaagttctcaccactgtgtggcaggtggctttatccatggag 78

                                                                       
Query: 545 ccatcccactggcccttgtattttttacagcagctttatgaggtatgtgcatttgctgtg 604
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 77  ccatcccactggcccttgtattttttacagcagctttatgaggtatgtgcatttgctgtg 18

                         
Query: 605 gccacttaatcatg 618
           ||||||||||||||
Sbjct: 17  gccacttaatcatg 4


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 618
Length of database: 1018
Length adjustment: 10
Effective length of query: 608
Effective length of database: 1008
Effective search space:   612864
Effective search space used:   612864
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

Query= MSMg01no209_k14.g1 MSMg01no209_k14.g1 CHROMAT_FILE:
MSMg01no209_k14.g1 PHD_FILE: MSMg01no209_k14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:33:52 2005
         (314 letters)



>mm_chr13_51135048_51135761
          Length = 714

 Score =  592 bits (306), Expect = e-173
 Identities = 312/314 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   tagaggtcctacatactgcatatgtccaatctccttttgggaaccactgtctctgccttt 60
           |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tagaggtcctacatactgcacatgtccaatctccttttgggaaccactgtctctgccttt 260

                                                                       
Query: 61  caccacaagaaagggtacttttcaattgcagctaattttcctgaacacaggtccacagac 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 caccacaagaaagggtacttttcaattgcagctaattttcctgaacacaggtccacagac 320

                                                                       
Query: 121 taagtgcccagtctcatgagatgactctaccacagacaccctatggagcatgcacacttc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 taagtgcccagtctcatgagatgactctaccacagacaccctatggagcatgcacacttc 380

                                                                       
Query: 181 tgaccagactgtgaccctgtgctgctcacatccctctctttggtttcaatgtcttgctgc 240
           |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgaccagaatgtgaccctgtgctgctcacatccctctctttggtttcaatgtcttgctgc 440

                                                                       
Query: 241 catggatcacagagccaagaagaaatgtttttagtgacactgatgacaaagagcaaaatt 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 catggatcacagagccaagaagaaatgtttttagtgacactgatgacaaagagcaaaatt 500

                         
Query: 301 acaagttaaaaaaa 314
           ||||||||||||||
Sbjct: 501 acaagttaaaaaaa 514


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 314
Length of database: 714
Length adjustment: 9
Effective length of query: 305
Effective length of database: 705
Effective search space:   215025
Effective search space used:   215025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)