TCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCTCAGTTGTTTTTTTTTTTAAGTTTAAAAATTTTACTTATGGTCTGA
GAAGATGGGCCGATGAGTAAAAGCACCACCTGAAATTCTTATGTTTTAGA
AAAAGAATCAGTTTCCAGAAGAAACCCTCTTACCCTCCTCTGAAAACCTG
CAATTGTTTTAAATCAGTTAGTTTTGAATTTAGTGATCATGGGTATTAAT
TGTACAAATATATGTTATGCTTGTATAGCCATGACCAACATATAATACAT
GCTCAACAAATATTAGCTACTATAATCATCAAAATATAGGTGCCTCAGTT
TCCCATATGTGTGTATTGTACATGAGAAAAGAAATCAGAGGTAGAAGTTT
CCTGTTACAGAGACTAGAAGAGAAAGGAGAGATGCTGAGCAGATATTCAA
ATGCCATGCAATTAAGGAGCCCTTAGTTTAAATGTATTTGTAGCATTATG
AAGTTAGTCTTTTTATAGCACCAGTTTTCAAGCAATTTGCATAACATTAA
CTATAATTATCACTGCTATTACTATTACAATTACTATTATTGTTTGGTTT
CTTCCCAAGCTGAATTCATATCTACTAAAGGAGGAGACTGACAGTTTCCA
TTACCAAAACTGCAGCATGTGTGAAAGGCCCACAGGGACTGTTTTCACCT
ATATTGATTGGGGCCTCTAGGTGTACCACATGTTCTATTTTCCTAATGCT
ACTAATACA

TCGATGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXTTTGTTTAGCTCTGAGCACTATTT
TTAATGGTGTTATTTGATTTTCTGGAGTCAACCTTCTTGAGTTCTGTATA
TATATTGGATATTAGTCCCCTATCTGATTTAGGATACGTAAAGATTATTT
CCCAATCTGTTGGTGGCCTTTTTGTATTATTGATGGTGTCTTTTGCCTTA
CAGAAGCTTTGCAATTTTATGAGGTCCCATTTGTGGATTTTCGATCTTAC
AGCACAAGCCATTGCTGTTCTATTCAGGAATTTTTCCCCTGTGCCCATAT
CTTTGAGGCTTTTCCCTCTTTTTCTCCTCCGCCACCTTTCAGTGTCTCTG
GTTTTATGTGGAGTTTCTTGATCCACTTTGATTTGTCCTTAATATAAGGA
GATAGGAATGGATCAATTTGCATTCTTCTTTATAATAACTGCCAGTTGTG
CCAGCACCATTTGTTGAAAATGTTGTCTTTTTTTCCACTGGATGGTTTTA
GCTCCCTCGTCAATGATCAAGTGACCTTAGGTGTGGGGGTTCATTTCTGG
GTCTTCAATTCTATTCCATTGGTCTACTCTCTGTTGCTATACCAGTACCA
TGCAGTTTTTATCACAAATGCTCTGTAGTAAAGCTTTAGAGCAGGCATGG
TGATTCCACCAGAGGTTCTTTTATCGTTGAGGAGACTTTTTGCTATCCTA
GN

Query= MSMg01no209_l21.b1 MSMg01no209_l21.b1 CHROMAT_FILE:
MSMg01no209_l21.b1 PHD_FILE: MSMg01no209_l21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:33:59 2005
         (715 letters)



>mm_chr13_7325838_7326952
          Length = 1115

 Score = 1278 bits (661), Expect = 0.0
 Identities = 697/711 (98%), Gaps = 5/711 (0%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattctcagttgtttttttttttaagtttaaaaattttacttatggtctgagaagatgg 64
           ||||||||||  |   ||||||| ||||||| |||| ||| |||||||||||||||||||
Sbjct: 210 gaattctcag--g---tttttttaaagtttataaatcttatttatggtctgagaagatgg 264

                                                                       
Query: 65  gccgatgagtaaaagcaccacctgaaattcttatgttttagaaaaagaatcagtttccag 124
           ||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 gccaatgagtaaaagcacaacctgaaattcttatgttttagaaaaagaatcagtttccag 324

                                                                       
Query: 125 aagaaaccctcttaccctcctctgaaaacctgcaattgttttaaatcagttagttttgaa 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 aagaaaccctcttaccctcctctgaaaacctgcaattgttttaaatcagttagttttgaa 384

                                                                       
Query: 185 tttagtgatcatgggtattaattgtacaaatatatgttatgcttgtatagccatgaccaa 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 tttagtgatcatgggtattaattgtacaaatatatgttatgcttgtatagccatgaccaa 444

                                                                       
Query: 245 catataatacatgctcaacaaatattagctactataatcatcaaaatataggtgcctcag 304
            ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 445 tatataatacatgctcaacaaacattagctactataatcatcaaaatataggtgcctcag 504

                                                                       
Query: 305 tttcccatatgtgtgtattgtacatgagaaaagaaatcagaggtagaagtttcctgttac 364
           |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 505 tttcccatatgtgtgtattgtacatgagaaaagaaatcagaggtagaaatttcctgttac 564

                                                                       
Query: 365 agagactagaagagaaaggagagatgctgagcagatattcaaatgccatgcaattaagga 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 agagactagaagagaaaggagagatgctgagcagatattcaaatgccatgcaattaagga 624

                                                                       
Query: 425 gcccttagtttaaatgtatttgtagcattatgaagttagtctttttatagcaccagtttt 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 gcccttagtttaaatgtatttgtagcattatgaagttagtctttttatagcaccagtttt 684

                                                                       
Query: 485 caagcaatttgcataacattaactataattatcactgctattactattacaattactatt 544
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 caagcaatttgcataacattaactataattatcactgctattactattacaattactatt 744

                                                                       
Query: 545 attgtttggtttcttcccaagctgaattcatatctactaaaggaggagactgacagtttc 604
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 attgtttggtttcttcccaagctgaattcatatctactaaaggaggagactgacagtttc 804

                                                                       
Query: 605 cattaccaaaactgcagcatgtgtgaaaggcccacagggactgttttcacctatattgat 664
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 805 cattaccaaaactgcagcatgtgtgaaaggcccacagggactgttttcacctatattgat 864

                                                              
Query: 665 tggggcctctaggtgtaccacatgttctattttcctaatgctactaataca 715
           |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 865 tggggcctctaggtgtaccacatgttctattttcctaatgctactaataca 915


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 715
Length of database: 1115
Length adjustment: 10
Effective length of query: 705
Effective length of database: 1105
Effective search space:   779025
Effective search space used:   779025
X1: 9 (17.8 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 9 (18.3 bits)
S2: 9 (18.1 bits)