Query= MSMg01no210_m01.b1 MSMg01no210_m01.b1 CHROMAT_FILE:
MSMg01no210_m01.b1 PHD_FILE: MSMg01no210_m01.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:35:25 2005
(176 letters)
>mm_chr13_51352825_51353402
Length = 578
Score = 282 bits (146), Expect = 6e-81
Identities = 169/178 (94%), Gaps = 4/178 (2%)
Strand = Plus / Plus
Query: 1 agaagtgtctctgtactggtagtctatctgtggagtgagaagacagagctctgcagagca 60
||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 203 agaagtg--tctgtactggtagtctatctgtggagtgagaagacagagctctgcagagca 260
Query: 61 ggacaccagacgggctggatcatacctgggtcggtagagtggatactcttcaaatgcagc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ggacaccagacgggctggatcatacctgggtcggtagagtggatactcttcaaatgcagc 320
Query: 121 ttggaggttttaggactcagtaaacat--tgtgtgtgtatgtgtgtgggttttatagg 176
|||||| ||||||||||||||||| ||||||||| |||||||||||||||||||
Sbjct: 321 gtggaggccataggactcagtaaacattgtgtgtgtgtgtgtgtgtgggttttatagg 378
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 176
Length of database: 578
Length adjustment: 8
Effective length of query: 168
Effective length of database: 570
Effective search space: 95760
Effective search space used: 95760
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no210_m01.g1 MSMg01no210_m01.g1 CHROMAT_FILE:
MSMg01no210_m01.g1 PHD_FILE: MSMg01no210_m01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:35:25 2005
(292 letters)
>mm_chr13_51409468_51410159
Length = 692
Score = 505 bits (261), Expect = e-147
Identities = 282/289 (97%)
Strand = Plus / Minus
Query: 1 attgctcctaattaaaaccgcatttacagagaacaaaccgtaggggcggcgcgcgtgcag 60
||||||||||||||||||||||||||||||||||||||||||||||||| | || |||||
Sbjct: 489 attgctcctaattaaaaccgcatttacagagaacaaaccgtaggggcggggagcatgcag 430
Query: 61 tgggatttccttgtagcttggaaaatgaatcaacttggaaaggggtaggggctgcctatc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 429 tgggatttccttgtagcttggaaaatgaatcaacttggaaaggggtaggggctgcctatc 370
Query: 121 tgcaaactccctgctgcagacaggacactgcccgtttccatccaaatataaaaacctgac 180
|||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||
Sbjct: 369 tgcaaactccctgctgcaaacaggacactgcccatttccatccaaatataaaaacctgac 310
Query: 181 ccatattgtaggggaatgtgctcatggggaccccagagagtgtcatcagagtgggggact 240
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 309 ccatattgtaggggaatgtgctcatggggaccccagagagtgtcatcagaatgggggact 250
Query: 241 gtttaaataggatgactgagtcatttgggggacctagaagctctgtcct 289
|||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 249 gtttaaataggatgactgagtcatttggtggacctagaagctctgtcct 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 292
Length of database: 692
Length adjustment: 9
Effective length of query: 283
Effective length of database: 683
Effective search space: 193289
Effective search space used: 193289
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
