Query= MSMg01no215_g24.b1 MSMg01no215_g24.b1 CHROMAT_FILE:
MSMg01no215_g24.b1 PHD_FILE: MSMg01no215_g24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:42:06 2005
(318 letters)
>mm_chr13_23308919_23309636
Length = 718
Score = 511 bits (264), Expect = e-149
Identities = 300/312 (96%)
Strand = Plus / Plus
Query: 5 gaattccagaaaatgctattgcaaaatgtgctgctcagatccatgtctaggattactgag 64
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 205 gaattccagaaaatgctattgcaaaatgtgctgctcagatccatgtctaggattactggg 264
Query: 65 gcttttttctaaacccctttgcatactggatgtgactttttctacctagaaaggaagaaa 124
||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 gcttttttcaaaacgtctttgcatactggatgtgactttttctacctagaaaggaagaaa 324
Query: 125 tggctctgaattatattaataaaataattttaatctttatgactgtggttggcactctgg 184
||| |||||| |||||||||||||||||||| ||||||||||||||||||||| |||||
Sbjct: 325 tggttctgaagtatattaataaaataatttttctctttatgactgtggttggcagtctgg 384
Query: 185 ggaatatgtctgtttctgcgaattatatgttcagttggtggggaatccctgagaagaaac 244
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 385 ggaatatgtctgtttctgcgaattatatgttcagttggtggggaagccctgagaagaaac 444
Query: 245 ccatacacgttattctcatccacttggcttttactaacatcataatccttcttacaaaag 304
|||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||
Sbjct: 445 ccatacacgttattctcatccacttggcttttacaaacatcctaatccttcttacaaaag 504
Query: 305 gactgccaaaga 316
||||||||||||
Sbjct: 505 gactgccaaaga 516
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 318
Length of database: 718
Length adjustment: 9
Effective length of query: 309
Effective length of database: 709
Effective search space: 219081
Effective search space used: 219081
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no215_g24.g1 MSMg01no215_g24.g1 CHROMAT_FILE:
MSMg01no215_g24.g1 PHD_FILE: MSMg01no215_g24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:42:06 2005
(285 letters)
>mm_chr13_22128015_22128699
Length = 685
Score = 480 bits (248), Expect = e-140
Identities = 272/284 (95%), Gaps = 7/284 (2%)
Strand = Plus / Plus
Query: 1 accttcgaatacggctcttgattcctttggcaggtgtatgtagtgttgaatgcactacag 60
|||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 208 accttcgagtacggctcttgattcctgtggcaggtgtatgtagtgttgaatgcactacag 267
Query: 61 agttgcttgtctcggtcagggtctcccagttttgtgttttgtgtaagccacaatgacctt 120
||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 268 agttgcttgtctcggtcagggtctcccagttttgtgt-------aagccacaatgacctt 320
Query: 121 ttgacttaaagttatattgtattctggcgtaatttgttcaaaatcaggtcagggctgagg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttgacttaaagttatattgtattctggcgtaatttgttcaaaatcaggtcagggctgagg 380
Query: 181 gtgtaaattcagctgggagagtgtttggcatacctgaagctcagcttagtccccattgct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gtgtaaattcagctgggagagtgtttggcatacctgaagctcagcttagtccccattgct 440
Query: 241 gcatatttttggatgaggtggagcgcatctataatgcttgtgtt 284
|| || |||||||||||||||||||||||||||||||||||||
Sbjct: 441 gcgtaagtttggatgaggtggagcgcatctataatgcttgtgtt 484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 285
Length of database: 685
Length adjustment: 9
Effective length of query: 276
Effective length of database: 676
Effective search space: 186576
Effective search space used: 186576
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
