Query= MSMg01no217_f15.b1 MSMg01no217_f15.b1 CHROMAT_FILE:
MSMg01no217_f15.b1 PHD_FILE: MSMg01no217_f15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:44:50 2005
(222 letters)
>mm_chr13_81697568_81698188
Length = 621
Score = 391 bits (202), Expect = e-113
Identities = 214/218 (98%), Gaps = 1/218 (0%)
Strand = Plus / Minus
Query: 5 gaattctatctggacggacaggcaatgcccagaggcataaagagtctgaaaggagaagct 64
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 gaattctatctggacggaaaggcaatgcccagaggcataaagagtctgaaaggagaagct 362
Query: 65 attactgacggtgagtcgtctgcattgtgactagctccactgaataggaaagagtctcaa 124
|||||||| ||||||| ||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 361 attactgatggtgagttgtctgcattgtgactagct-cactgaataggaaagagtctcaa 303
Query: 125 ctctttaattaaaaagtttgaattttttgaaagaaagagctagcaaatattttggaactt 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 ctctttaattaaaaagtttgaattttttgaaagaaagagctagcaaatattttggaactt 243
Query: 185 gactttatgttttctctagtaaatctgtgtgcctacca 222
||||||||||||||||||||||||||||||||||||||
Sbjct: 242 gactttatgttttctctagtaaatctgtgtgcctacca 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 222
Length of database: 621
Length adjustment: 9
Effective length of query: 213
Effective length of database: 612
Effective search space: 130356
Effective search space used: 130356
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no217_f15.g1 MSMg01no217_f15.g1 CHROMAT_FILE:
MSMg01no217_f15.g1 PHD_FILE: MSMg01no217_f15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:44:50 2005
(263 letters)
>mm_chr13_81529896_81530558
Length = 663
Score = 493 bits (255), Expect = e-144
Identities = 261/263 (99%)
Strand = Plus / Plus
Query: 1 atgcaattttatatccttgtacataaaaatattaacaaatggctacataattagttatgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 atgcaattttatatccttgtacataaaaatattaacaaatggctacataattagttatgt 260
Query: 61 agttaataatgaccatgagctacatgctattttctttctcttgcaagcttcctgctatag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agttaataatgaccatgagctacatgctattttctttctcttgcaagcttcctgctatag 320
Query: 121 aactccagccacaaaaaatccctaaagtttgagaacttcctcccagtagatgaaacatct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aactccagccacaaaaaatccctaaagtttgagaacttcctcccagtagatgaaacatct 380
Query: 181 gggacttagggcagcatatatgacagcacaaggctgggaatcagtgtcttttctcctcac 240
| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gtgacttagggcagcataaatgacagcacaaggctgggaatcagtgtcttttctcctcac 440
Query: 241 aatgtgctttctacacactaaat 263
|||||||||||||||||||||||
Sbjct: 441 aatgtgctttctacacactaaat 463
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 263
Length of database: 663
Length adjustment: 9
Effective length of query: 254
Effective length of database: 654
Effective search space: 166116
Effective search space used: 166116
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
