CTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCATCAGTGGATCTTTCTGGTTGTGAACTTGGGGGCTGTTTTATCAG
TCTGTCTTATTGATCATCATCATTCTGCTCAGGGGTTTTTGCATCTTCCT
AAGTCAATTGTGGGTAGAATTGTCTAGGAATATATCGATTTCTCCTAAGT
TTTCAAATTCATTAGAGTATGATGTTGGAAAGAATCCTACTGATCTGGGT
TTCAGTGTTACCTGCTATAAGATCACTTTTTGGCCACTAAGTTGATTAGT
TTATTAATGTCCCTTTCCTTTTTTTTTTTACTAGTTTTGTGAAAAGCCTG
TTAATTTTATATATCCTTTCCCAACACCAACCCTTTGATTCATTGATCTG
TTACATTGTTCATTTATGTTTCCACTTCATTAATTTCATTTTTGATCTTT
ATCTTCTATTAATTTTTGAGATTGGCTTCCTCTTGTTTTTCCAAGGACTT
CAGGTGTATTGTTGAGGGTTTTGTTTTTGTTTTTTGTTTTTTTGACACCC
ACTTTTTTCTTCCATTTCCTCCCTCAATTTTTTTTCCTTCTCCCCCCCTT
TTCTTTCCCCTCTTTCCTCTTCCTCACTTCTTTTTTTTTTAACTCCCCTT
TTTTTTTCCCTCCCCCCTTTCTCTTTCCATTGCACTCTTAATATTTTATT
ATTCTTTTCACTCTATACATGTTTATTGTTTG

CGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXCAGGACAGCCAGAGCTATACAGAG
AAACCCTGTCTCGAACCCCCCCCCAAAAAAAGTCATATGAAGAAAAGTAA
GAATCACAATTTACCTGTAGTATCACCAGTTTAACAAAATGATGTTTGTG
GTCTTTACCATGCTGTATCATGATTAGTGATGCCCCCCTGATGTCACATA
AATTTAGAACATTCTCACAGGCAGAATTATTCCATATATAGGGGAGAAAA
AAATCTAAAAATTATTCTGAATATAAATTTCAAATCACTGTTCTCTTAAA
AGAACATTTCAAACCCCCTTTTTTTTTTCCACACCAAAACCTGCCCCCAA
GGGTTTTTTCCACCCAGAACAACTTTGGAGAGTGAGGGAGTATGAAAATA
CATCCATTGAAATCTTTTCTAAGAATCATCTTTGTTAGTGAATATTTCTG
CCATTTCTCATATCCCCTCGGCTTCAATCAAAATATGTATGTTTATGATT
CCTGTTCTTAAAATGATTTAAGTAGAAAAACTAACCGGCTCTTTGTTGGT
ATTAACTAGACAATGTGATGCATTGACTATATTAGAGATAAAGCTAGTAT
TTCATTTGTCTGGATTTAAGGAAAGACCGGAGCTCTAATCCCAACTGTGA
CACTTTGTAGTTATGACCTTGGAGCAATGGCTTTT

Query= MSMg01no235_g01.g1 MSMg01no235_g01.g1 CHROMAT_FILE:
MSMg01no235_g01.g1 PHD_FILE: MSMg01no235_g01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:52:41 2005
         (596 letters)



>mm_chr13_48718497_48719490
          Length = 994

 Score = 1087 bits (562), Expect = 0.0
 Identities = 589/602 (97%), Gaps = 9/602 (1%)
 Strand = Plus / Minus

                                                                       
Query: 1   caggacagccagagctatacagagaaaccctgtctcgaa-----cccccccccaaaaaaa 55
           ||||||||||||||||||||||| |||||||||||||||     ||||||||||||||||
Sbjct: 838 caggacagccagagctatacagaaaaaccctgtctcgaaaccaccccccccccaaaaaaa 779

                                                                       
Query: 56  gtcatatgaagaaaagtaagaatcacaatttacctgtagtatcaccagtttaacaaaatg 115
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 778 gtcatatgaagaaaagtaagaatcacaatttacctgtagtatcaccagtttaacaaaatg 719

                                                                       
Query: 116 atgtttgtggtctttaccatgctgtatcatgattagtgatgcccccctgatgtcacataa 175
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 718 atgtttgtggtctttaccatgctgtatcatgattagtgatgcccccctgatgtcacataa 659

                                                                       
Query: 176 atttagaacattctcacaggcagaattattccatatataggggag-aaaaaaatctaaaa 234
           ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 658 atttagaacattctcacaggcagaattattccatatataggggagaaaaaaaatctaaaa 599

                                                                       
Query: 235 attattctgaatataaatttcaaatcactgttctcttaaaagaacatttcaaaccccctt 294
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  
Sbjct: 598 attattctgaatataaatttcaaatcactgttctcttaaaagaacatttcaaaccccc-- 541

                                                                       
Query: 295 ttttttttccacaccaaaacctgcccccaagggttttttccacccagaacaactttggag 354
            |||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 540 -tttttttccaaaccaaaacctgcccccaagggttttttccacccagaagaactttggag 482

                                                                       
Query: 355 agtgagggagtatgaaaatacatccattgaaatcttttctaagaatcatctttgttagtg 414
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 agtgagggagtatgaaaatacatccattgaaatcttttctaagaatcatctttgttagtg 422

                                                                       
Query: 415 aatatttctgccatttctcatatcccctcggcttcaatcaaaatatgtatgtttatgatt 474
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 aatatttctgccatttctcatatcccctcggcttcaatcaaaatatgtatgtttatgatt 362

                                                                       
Query: 475 cctgttcttaaaatgatttaagtagaaaaactaaccggctctttgttggtattaactaga 534
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 cctgttcttaaaatgatttaagtagaaaaactaaccggctctttgttggtattaactaga 302

                                                                       
Query: 535 caatgtgatgcattgactatattagagataaagctagtatttcatttgtctggatttaag 594
           |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 301 caatgtgatgcattgactatattagagataaagctagtattttatttgtctggatttaag 242

             
Query: 595 ga 596
           ||
Sbjct: 241 ga 240


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 596
Length of database: 994
Length adjustment: 10
Effective length of query: 586
Effective length of database: 984
Effective search space:   576624
Effective search space used:   576624
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)