Query= MSMg01no237_e11.b1 MSMg01no237_e11.b1 CHROMAT_FILE:
MSMg01no237_e11.b1 PHD_FILE: MSMg01no237_e11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:55:04 2005
(651 letters)
>mm_chr13_16872310_16873360
Length = 1051
Score = 1131 bits (585), Expect = 0.0
Identities = 631/663 (95%), Gaps = 26/663 (3%)
Strand = Plus / Minus
Query: 15 aagcccaaagaattaaccaacattcaaatgagctacctacctactgaagtccctaatgga 74
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 733 aagcccaaagaattaaccaacattcaaatgagctacctacatactgaagtccctaatgga 674
Query: 75 ctatgtggagagatagtcacttgcaatgacgtaatggaaccatatgtaatcccatctccc 134
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 673 ctatgtggagagatagtcacttgcaatgacgtaatggaaccatatgtaatcccatctccc 614
Query: 135 tgtagaaggtaaacgccatacaaataaatgatcagtttacagaatgacctctgaatgacc 194
|||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 613 tgtagaaggtgaacgccatacaaataaacgatcagtttacagaatgacctctgaatgacc 554
Query: 195 agctttggtttgagcagaggccttttccacctttgcaagttggtgataaatcagcaacca 254
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 553 agctttggtttgagcagaggccttttccacctttgcaagttggtgataaatcagcaacca 494
Query: 255 gttgaccttttgcacacatgcaaaaaattgtctcccaatatttccccattatatatttgc 314
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 493 gttgaccttttgcacacatgcaaaaaattgtctcccaatattttcccattatatatttgc 434
Query: 315 caacattgagtgtgaggtggagaactgaatatacacaactgtagaaaattagcctcaaat 374
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 433 caacattgagtgtgaggtggagaactgaatatacataactgtagaaaattagcctcaaat 374
Query: 375 gggtcaccagtgtttggctgacactctggctgttacttcagaaaagaaagaaaaaaacag 434
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 gggtcaccagtgtttggctgacactctggctgttacttcagaaaagaaagaaaaaaacag 314
Query: 435 ggtgtaatattaataataatagcaaatacaatagatcatctgaaaaagagagctgtcatc 494
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 ggtgtaatattaataataatagcaaatacaatagatcatctgaaaaagagagctgtcatc 254
Query: 495 ttacttccagcatatgttgataatctggttaggtg------------------------- 529
|||||||||||||||||||||||||||||||||||
Sbjct: 253 ttacttccagcatatgttgataatctggttaggtgttttttttttttttttttttttttt 194
Query: 530 -ttttttttttggtcatttgacactaccttggttcatctaagaagaaggtgcttcaactg 588
||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 193 tttttttttttggtcatttgacactaccttggttcatctaggaagaaggtgcttcaactg 134
Query: 589 agaagttgtctccttcagattggcctgtaggtgagtttgtagaacattgacttggttaat 648
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 133 agaagttgtctccttcagattggcctgtaggtgagtttgtagaacattgacttggttaat 74
Query: 649 tgt 651
|||
Sbjct: 73 tgt 71
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 37
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 651
Length of database: 1051
Length adjustment: 10
Effective length of query: 641
Effective length of database: 1041
Effective search space: 667281
Effective search space used: 667281
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no237_e11.g1 MSMg01no237_e11.g1 CHROMAT_FILE:
MSMg01no237_e11.g1 PHD_FILE: MSMg01no237_e11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:55:04 2005
(451 letters)
>mm_chr13_16825512_16826362
Length = 851
Score = 772 bits (399), Expect = 0.0
Identities = 421/429 (98%), Gaps = 2/429 (0%)
Strand = Plus / Plus
Query: 1 ccatgtgactgtgtagtatggccacatggaagaaccactgagccacaaatatttgacctc 60
|||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 201 ccatgtgattgtgtagtatggccacatggaagaaccactgagccaaaaatatttgacctc 260
Query: 61 tcagagccgcaagagagatttgtaaacataaaaacttgtagattccaggacaaaactctg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tcagagccgcaagagagatttgtaaacataaaaacttgtagattccaggacaaaactctg 320
Query: 121 aaagctgaccttagctgggaaacatataaacatgactggaaatcagagttcctttcacat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aaagctgaccttagctgggaaacatataaacatgactggaaatcagagttcctttcacat 380
Query: 181 acaaacctctaggtacagttttttgatggacacagccctcctgaaagaccaaggtccatg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 acaaacctctaggtacagttttttgatggacacagccctcctgaaagaccaaggtccatg 440
Query: 241 gagaaatcaggatgtatcattataaatactcaaaagccaacaatgaaagttggtgagaga 300
|||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||| |
Sbjct: 441 gagaaatcgggatgtatcatgataaatactcaaaagccaacaatgaaagttggtgagata 500
Query: 301 agagaacaggcatagatgggactgtggaaaggaggatgagaagaatataagagagaaaca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 501 agagaacaggcatagatgggactgtggaaaggaggatgagaagaatataagagggaaaca 560
Query: 361 tttagtttacagatcaaaactattgcagtttatgagcacttgagttgcatattgtgtgta 420
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tttagtttacagatcaaaactattgcagtttatgagcacttgagttgcatattgtgtgt- 619
Query: 421 tgtgtgtat 429
||||||||
Sbjct: 620 -gtgtgtat 627
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 451
Length of database: 851
Length adjustment: 10
Effective length of query: 441
Effective length of database: 841
Effective search space: 370881
Effective search space used: 370881
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
