Query= MSMg01no260_e24.b1 MSMg01no260_e24.b1 CHROMAT_FILE:
MSMg01no260_e24.b1 PHD_FILE: MSMg01no260_e24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:56:22 2005
(652 letters)
>mm_chr13_22264826_22265877
Length = 1052
Score = 1212 bits (627), Expect = 0.0
Identities = 642/647 (99%)
Strand = Plus / Minus
Query: 6 gaattccacacacatttaccacattgacatgtgattgtgattgctaaagaaactctaatt 65
|||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||
Sbjct: 852 gaattccacacacattaaagacattgacatgtgattgtgattgctaaagaaactctaatt 793
Query: 66 tatgctgggcatgcatgtttttacccactagccctgtgtctctgactccagtccctgcat 125
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 792 tatgctaggcatgcatgtttttacccactagccctgtgtctctgactccagtccctgcat 733
Query: 126 gaagagttctcagcaggcttgactcagttaccccaatatagaaatgtacaatatgacttt 185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 732 gaagagttctcagcaggcttgactcagttaccccaatatagaaatgtacaatatgacttt 673
Query: 186 ctatgtcttatgatatgacaaaactgctattttggcttctgtaacttgtttatgcagagg 245
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 672 ctatgtcttatgatatgacaaaactgctattttggcttctgtaacttgtttatgcagagg 613
Query: 246 cctaaatattgttttgacttacttgacccacttacactatcagcacagaccattattgct 305
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 612 cctaaatattgttttgacttacttgacccacttacactagcagcacagaccattattgct 553
Query: 306 tgcttatgtagagactgaaggtctacttgtgtcttttacatgaaaataaaaacctttcgc 365
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 552 tgcttatgtagagactgaaggtctacttgtgtcttttacatgaaaataaaaacctttcgc 493
Query: 366 atacccttccctcagaacatacttgaaattatgctttcaggctgatatcatgttaacaag 425
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 492 atacccttccctcagaacatacttgaaattatgctttcaggctgatatcatgttaacaag 433
Query: 426 taatcaataaattttttagttacagtggagaccccagattcctgaccgctggcccaggat 485
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 432 taatcaataaattttttagttacagtggagaccccagattcctgaccgctggcccaggat 373
Query: 486 agttcccagagagaagaagtccaaagtggacttgataagtccccagaaacataaattaca 545
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 agttcccagagagaagaagtccaaagtggacttgataagtccccagaaacataaattaca 313
Query: 546 actgcctgaagtttgtaaattaaaagcaaaaacaaatgtgtgtctgaagcatggactgat 605
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 actgcctgaagtttgtaaattaaaagcaaaaacaaatgtgtgtctgaagcatggactgat 253
Query: 606 ttgtgagttgtgttgttttggagacccgacatttggtgagacaaatg 652
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 252 ttgtgagttgtgttgttttggagacccgacatttggtgagacaaatg 206
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 652
Length of database: 1052
Length adjustment: 10
Effective length of query: 642
Effective length of database: 1042
Effective search space: 668964
Effective search space used: 668964
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no260_e24.g1 MSMg01no260_e24.g1 CHROMAT_FILE:
MSMg01no260_e24.g1 PHD_FILE: MSMg01no260_e24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:56:22 2005
(674 letters)
>mm_chr13_22098805_22099878
Length = 1074
Score = 1232 bits (637), Expect = 0.0
Identities = 664/673 (98%), Gaps = 2/673 (0%)
Strand = Plus / Plus
Query: 3 aggaccttcagccgggcccaggtcgccagcgagccagcgtaggagcctccgaagcagatc 62
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 203 aggaccttcagccgggcccaggtcgccagcgagccagcgtaggagcctccgaagcagatc 262
Query: 63 caagggctggaagaagacacattgaggaggccggagagcgcctggcgagcggaggccacg 122
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 263 caagggctggaagaagacacattgaggaggccggagagcgcctggcgagcggaagccacg 322
Query: 123 tcagccaacctgcaaaggagccaaagtcgaaccttacactcctgggggccactgtgtaga 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 tcagccaacctgcaaaggagccaaagtcgaaccttacactcctgggggccactgtgtaga 382
Query: 183 atgataccaaaacctaagctgggcccaaggttccttccggtaactctctctgcctaggcc 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 atgataccaaaacctaagctgggcccaaggttccttccggtaactctctctgcctaggcc 442
Query: 243 aagggagaaggtccacccatttcaggtgagaacggaaaagtttcctagcgccttaggtta 302
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 aagggagaaggcccacccatttcaggtgagaacggaaaagtttcctagcgccttaggtta 502
Query: 303 aaaacttaaacaaaaaatag-ggagaagccagaggcagtcgaggagggcgccccagaaga 361
|||||||||||||||||||| || || |||||||||||||||||||||||||||||||||
Sbjct: 503 aaaacttaaacaaaaaatagagg-gacgccagaggcagtcgaggagggcgccccagaaga 561
Query: 362 agaagggctctaggcaggatgggctatggaactgaggactgggagaaactcaaaaagaaa 421
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 562 agaagggctctaggcaggatgggctatggaactgaggactgggagaaactcaaaaagaaa 621
Query: 422 ggagaaagataccgggatataacatcctttctcttcctcgtcttttttgaggtggttttc 481
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 622 ggagaaagataccgggatataacatcctttctcttcctcgtcttttttgaggtggttttc 681
Query: 482 agtcagtgagtagctgccattcgaagccagtagagcttactgagaacactgagatggaga 541
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 682 agtcggtgagtagctgccattcgaagccagtagagcttactgagaacactgagatggaga 741
Query: 542 gacacaaagagatggaaacaagaccgataggagggagaccgatagaggaagagaggtgcc 601
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 742 gacacaaagagatggaaacaagatcgataggagggagaccgatagaggaagagaggtgcc 801
Query: 602 taggtgaaaaggaagagataaggctcgtggaggacactaaagcaggtgagaagttggcga 661
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||
Sbjct: 802 taggtgaaaaggaagagataaggctcgtggagaacactaaagcaggtgagaagttgggga 861
Query: 662 aagaggtgatggg 674
|||||||||||||
Sbjct: 862 aagaggtgatggg 874
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 36
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 674
Length of database: 1074
Length adjustment: 10
Effective length of query: 664
Effective length of database: 1064
Effective search space: 706496
Effective search space used: 706496
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
