Query= MSMg01no261_j03.b1 MSMg01no261_j03.b1 CHROMAT_FILE:
MSMg01no261_j03.b1 PHD_FILE: MSMg01no261_j03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:57:59 2005
(237 letters)
>mm_chr13_20455956_20456592
Length = 637
Score = 443 bits (229), Expect = e-129
Identities = 232/233 (99%)
Strand = Plus / Minus
Query: 1 atgtggccttgattcagcactaggccctgtggtaggcattcctaccaaacacccaggtga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 atgtggccttgattcagcactaggccctgtggtaggcattcctaccaaacacccaggtga 396
Query: 61 tactgatgctcaaagttaaggacaacgttctgaaatataaagcagtgttccctcagtcta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 395 tactgatgctcaaagttaaggacaacgttctgaaatataaagcagtgttccctcagtcta 336
Query: 121 gcagctgagtcccagatccacaccccgcccccaccttcccaccattcacaactctttgat 180
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 335 gcagctgagtcccagatccacaccccgcccccaccttcccaccatttacaactctttgat 276
Query: 181 ccattcacacacacacacacacacacacacacacacacacacacacacacaca 233
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 275 ccattcacacacacacacacacacacacacacacacacacacacacacacaca 223
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 71
Number of extensions: 26
Number of successful extensions: 26
Number of sequences better than 10.0: 1
Number of HSP's gapped: 24
Number of HSP's successfully gapped: 1
Length of query: 237
Length of database: 637
Length adjustment: 9
Effective length of query: 228
Effective length of database: 628
Effective search space: 143184
Effective search space used: 143184
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no261_j03.g1 MSMg01no261_j03.g1 CHROMAT_FILE:
MSMg01no261_j03.g1 PHD_FILE: MSMg01no261_j03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:57:59 2005
(501 letters)
>mm_chr13_20306789_20307689
Length = 901
Score = 922 bits (477), Expect = 0.0
Identities = 495/501 (98%), Gaps = 1/501 (0%)
Strand = Plus / Plus
Query: 1 aaggagaaaatgggaccagatagcagagtcggaatatctactttcatcagggtgtgttgg 60
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 202 aaggagaaaatgggaccagatagcagagtcgaaatatctactttcatcagggtgtgttgg 261
Query: 61 ctcttgcctttaatctcagcacttaggaagcaaaggctggtagattttctgagtatacct 120
||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||
Sbjct: 262 ctcttgcctttaatctcagcacttaggaagcaaaggctggtagatct-ctgagtatacct 320
Query: 121 ggtcttcaagagagtcccagactagctagggctgcaaaaggaagaactatctgccttcat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ggtcttcaagagagtcccagactagctagggctgcaaaaggaagaactatctgccttcat 380
Query: 181 gaagtttactgttcatcacctccttggcaacatatttggttataaagcctgcacttgcat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gaagtttactgttcatcacctccttggcaacatatttggttataaagcctgcacttgcat 440
Query: 241 aagaatgatgtttagttatttcagatgatttttttctaagtctattttcctagccacata 300
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 441 aagaatgatgtttagttatttcagatgatctttttctaagtctattttcctagccacata 500
Query: 301 aaatatcagaatatacttacccaactaatgcaccaacttcaacttactgtttagaattga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aaatatcagaatatacttacccaactaatgcaccaacttcaacttactgtttagaattga 560
Query: 361 cttcttgtacaggggttcctaattttaattatttatactgtttctaacttgtattaggaa 420
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 cttcttgtataggggttcctaattttaattatttatactgtttctaacttgtattaggaa 620
Query: 421 aacgtaggaaaatagatgcaatattttcctgtagatcagtgtgcagaatataagaaggag 480
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 621 aacgtaggaaaatagatgcaatattttcctgtagatcagtgtgcagaatataggaaggag 680
Query: 481 gaatttttctcttatatttga 501
|||||||||||||||||||||
Sbjct: 681 gaatttttctcttatatttga 701
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 501
Length of database: 901
Length adjustment: 10
Effective length of query: 491
Effective length of database: 891
Effective search space: 437481
Effective search space used: 437481
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
