CAATXXXXXXXXXXXXXXXXXXXXXXXXATATCCCAAAAACCGCGGAATT
CTAATGGTGTTCGTAACACCTTCCAATCTGCAGTTCTCAAGATTTGTGAC
ATGATTCTTTCTGCTTGCCCATGCTGGTGTGTGTGTGTGTGTGTGTGTGT
GTGTGTGTGTGTGTGTATCACCNCCACCCACCCCCAACCCAAAACACAAC
AAACACCAACCCCCCCCCCCACCCCACACAAAACACAAAAAAAAATAAAC
ACAACAACCCAACAAAAAAAAACAAAAACAAACACCCCCCCCCCACCCAC
CCCCCCACAACCATTTTTACACAAAAAAACACCACCAAAAACATACAACC
ACCATAAATTATCCCCCCCTCCCCCCCCCAAAACCACACACACTCTCTCC
CCTCCCCCACAACCTCCCCCCCCCATAAACAACCAATAAAAACACCACAC
TCCCAACCCCCATAATAACCACCCACCTCCACACCCAAAAAACACAAACA
CCCCCCCACCCAACCAAATACAACAAAACCCTCCCACCACCAAAAAAAAC
CCCAAACCCACCCACAACCCAAAATCACCACCCACACCCATACACACAAA
AAAACCCACAACAACCCCACCAAAATCCCTATCCCCCCACCCCACCACAC
AAAAACACAACCATCCCACCCCACACAAACACACATACACCACCACCAAA
AAAAAANACCAAAACCACCCCAATATCTCTTACAACAACATCCCCAACCT
TTACTCACTAACCACCCCACCCACACAATTACACCCCACCACACACCCAC
CCCACCTCACCCCACCN

AATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXAACAGTCATTTATTCTCAGAACCTTGA
CCAGCTAGGAGCCTTTGCATTAACTGCAAAGGGAAACTTCTTTGATGAAG
GCTGAAGCTATCACTAGTTTATGAGCAGAAGCTTAAATATTTATGAGGCA
GGAGTTAGTAGGATGGGTCAGCACATGGTAATGCCACATGCCACCAAGCC
AAATGACCTAAATTTGACCCTGGACCCACATGATGGAAAAAGGGAATGGA
TGAGTTGTATACCCACATGTGTATCTTCAGGAATGGGAGCCTTAAGCTGT
AGGAGTGCTTCATACTGAAGCTAAGTGAAAGGAAATCTGGAAGCAGGAAC
TATGCAACAGAGCCTGACTGGGTGGGACAGGGAGCCACCAGCCAGTTGGT
CAGCAAAGCCAAGCATGAGGGATGGAGGTTCCAGAGCACAGGTGCTGTGA
CCTGGGGATGTGATGTCTGGGAAGTAAGAGGCATGGTGATAGGCACCGAA
ATGCTTAAGGTTCCAGGGAAAAGGAAAGAAACTAAAATAGGTAGGACAAA
GGTTCAAGGTGGGGTCTGGGTTTATTGCACCTGGGGGTAAAGTAGAACTA
GGGTCACCACAAAATCTCATGGTGCTACCAGAAGATCTATGGGTAAAGGA
AGGCTGCATGGGTACAGAACCCAGTGCCTTCG

Query= MSMg01no261_o16.g1 MSMg01no261_o16.g1 CHROMAT_FILE:
MSMg01no261_o16.g1 PHD_FILE: MSMg01no261_o16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:58:25 2005
         (659 letters)



>mm_chr13_18688676_18689736
          Length = 1061

 Score = 1123 bits (581), Expect = 0.0
 Identities = 646/679 (95%), Gaps = 20/679 (2%)
 Strand = Plus / Plus

                                                                       
Query: 1   aacagtcatttattctcagaaccttgaccagctaggagcctttgcattaactgcaaaggg 60
           |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 183 aacagtcatttattctcagaaccttgaccagctatgagcctttgcattaactgcaaaggg 242

                                                                       
Query: 61  aaacttctttgatgaaggctgaagctatcactagtttatgagcagaagcttaaatattta 120
           || ||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 243 aagcttctttgaggaaggctgaagctatcactagtttatgagtagaagcttaaatattta 302

                                                                       
Query: 121 tgaggcaggagttagtaggatgggtcagcacatggtaatgccacatgccaccaagccaaa 180
           |||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 303 tgaggcaggagttaataggatgggtcagcacatggtaataccacatgccaccaagccaaa 362

                                                                       
Query: 181 tgacctaaatttgaccctggacccacatgatggaaaaagggaatggatgagttgtatacc 240
           ||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||
Sbjct: 363 tgacctaaatttgaccctgaacccacatgatggaagaagggaatggatgagttgtatacc 422

                                                                       
Query: 241 cacatgtgtatcttcaggaatgggagccttaagctgtaggagtgcttcatactgaagcta 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 423 cacatgtgtatcttcaggaatgggagccttaagctgtaggagtgcttcatactgaagcta 482

                                                                       
Query: 301 agtgaaaggaaatctggaagcaggaactatgcaacagagcctgactgggtgggacaggga 360
           |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 483 agtgaaaggaaatctggaagcaggaactatgcaacagagcttgactgggtgggacaggga 542

                                                                       
Query: 361 gccaccagccagttggtcagcaaagccaagcatgagggatggaggttccagagcacaggt 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 543 gccaccagccagttggtcagcaaagccaagcatgagggatggaggttccagagcacaggt 602

                                                                       
Query: 421 gctgtgacctggggatgtgatgtctggga------------------agtaagaggcatg 462
           ||||||| |||||||||||||||||||||                  |||||||||||||
Sbjct: 603 gctgtgaactggggatgtgatgtctgggatcaagaaggtgcacgggaagtaagaggcatg 662

                                                                       
Query: 463 gtgataggcaccgaaatgcttaaggttccagggaaaaggaaagaaactaaaataggtagg 522
           |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 663 gtgataggcaccgaaatgcttaaggttccagggaaaaggaaagaaactaaaacaggtagg 722

                                                                       
Query: 523 acaaaggttcaaggtg-gggtctgggtttattgcacctggggg-taaagtagaactaggg 580
           |||||||||||||||| |||||||||||||| ||||||||||| ||||||||||||| ||
Sbjct: 723 acaaaggttcaaggtgagggtctgggtttatagcacctggggggtaaagtagaactaagg 782

                                                                       
Query: 581 tcaccacaaaatctcatggtgctaccagaagatctatgggtaaaggaaggctgcatgggt 640
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 783 tcaccacaaaatctcatggtgctaccagaagatctatgggtaaaggaaggctgcatgggt 842

                              
Query: 641 acagaacccagtgccttcg 659
           |||||||||||||||||||
Sbjct: 843 acagaacccagtgccttcg 861


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 659
Length of database: 1061
Length adjustment: 10
Effective length of query: 649
Effective length of database: 1051
Effective search space:   682099
Effective search space used:   682099
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)