TATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTCACAGGATCCGCGG
AATTCATTACACTCTTTCCAAGTGACATTAAAAAAAAAAAGCCATACACA
CACAAAACTCAAAATCTGCATAGTACCGCAGCCAGTCTATAGGGGGAAAT
TGTTCTCGTTTGATTGAGTCAGCTTTGTTCTGCTATGCCAAGACAATTTC
CTTGTGTGTTTGCAAATTATCTGAGCCACAGTGACAACCTCCCACCAACA
CTCTGTATGTGAGAACAGGAACCTATTATGTCCATGCTGAGAGCTGTCCA
TTTAGCTTTCTCCACTTGAAGATTCTTTGACTGGGGTCTCCTTATCTCAC
AGGTTTCCTCTTTTTTTTTGACCCCTACCCGTACCGTCTCGCTTCTTGCT
CTTTGCTCTTCTTTCTCTCACCCCCAAACTGAAATTAAATTCTTCCTCTC
TTTCAGGCTCCTTGTTATCTCAAACAATAGGACCTCTTTTTTATGTCATC
TGCCTTCATTCTTTCTATGCTCTATCAACACCAGTCTGTTACATTTGAAG
ACTTATGGCCTCTATTTTTACAATGATGTTTTCCTTTATATTTATGTTTT
TACTGTGTTTTTTATATTTCCTCTTGCTTTTCATTTTGCCTCTGTCTATT
AGCTAGTTTGATCGGCTTCACATCCTTTTCCCACCATTCTATCTCCTCTT
ACAAGTTTTACTAAATATTACCTTTATCATTACTTCTAACATATGTTTAT
TTTCATTCTTTG

CATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXTTTCTCTAAATCCTAACCAATATTA
TTTGACCTGCTCTCCAGCACATACCATGCTAGAATAAAATCTCTTAAGCC
ATGAGCCTGAAGCACTGCTTCCCTTACATTGTCAAGTCATGTATTTCATA
ACAATGATTAAAGAAAGGGATTACTAGCAAAATGACAGATGATAATACTG
CTAATTATAAATTGCATTTATCTATTGGTGTGGGGGATGAGCCTGTGTGT
GCACATTTATTTATGTGTTCTACAGCTTAATTGCAGAGATCAGAGGACAA
CTTTCCCAAGAGTTGGTTTTCTCCTCCCTTAGTTGGGAAAGTATCTAGGG
TCATCAGGCTTGGCAACAAGCATTGTTGCCCACTGAATGATTCTGCTGAT
CTACCTGTTTTAAACAATTTCAGATAAATATATAATCACGGGGGTTGTAG
GAGCTGGGGGCAGCACTGGACAATTGTATGACAGCAAGACAGAGAGCAGA
AAAGGCAAGATATTTAAAATAAGCCATTTATGCACAGCGAGATTATGTTG
TTCTGTTTGTTTTCTTTTCAAGAGTTGAGAATANAAGGGACTTAACATTA
GACAGGAACACTTTTTTTTAAAATTGGATAATCTGCGACAGGTTAATACT
AAGTTATCACGTATGACCAACTGACTTTTACCCCTTTTATGGACTGTA

Query= MSMg01no263_e13.b1 MSMg01no263_e13.b1 CHROMAT_FILE:
MSMg01no263_e13.b1 PHD_FILE: MSMg01no263_e13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:00:09 2005
         (244 letters)



>mm_chr13_119547787_119548430
          Length = 644

 Score =  433 bits (224), Expect = e-126
 Identities = 239/244 (97%)
 Strand = Plus / Minus

                                                                       
Query: 1   gacattaaaaaaaaaaagccatacacacacaaaactcaaaatctgcatagtaccgcagcc 60
           |||||| |||||||||||||||||||||||||||||||||||||||||||||  ||||||
Sbjct: 444 gacatttaaaaaaaaaagccatacacacacaaaactcaaaatctgcatagtaaggcagcc 385

                                                                       
Query: 61  agtctatagggggaaattgttctcgtttgattgagtcagctttgttctgctatgccaaga 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 agtctatagggggaaattgttctcgtttgattgagtcagctttgttctgctatgccaaga 325

                                                                       
Query: 121 caatttccttgtgtgtttgcaaattatctgagccacagtgacaacctcccaccaacactc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 caatttccttgtgtgtttgcaaattatctgagccacagtgacaacctcccaccaacactc 265

                                                                       
Query: 181 tgtatgtgagaacaggaacctattatgtccatgctgagagctgtccatttagctttctcc 240
           ||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||
Sbjct: 264 tgtatgtgagaacaggaacctattaggcccatgctgagagctgtccatttagctttctcc 205

               
Query: 241 actt 244
           ||||
Sbjct: 204 actt 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 244
Length of database: 644
Length adjustment: 9
Effective length of query: 235
Effective length of database: 635
Effective search space:   149225
Effective search space used:   149225
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)

Query= MSMg01no263_e13.g1 MSMg01no263_e13.g1 CHROMAT_FILE:
MSMg01no263_e13.g1 PHD_FILE: MSMg01no263_e13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:00:09 2005
         (555 letters)



>mm_chr13_119377159_119378113
          Length = 955

 Score = 1065 bits (551), Expect = 0.0
 Identities = 554/555 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   tttctctaaatcctaaccaatattatttgacctgctctccagcacataccatgctagaat 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tttctctaaatcctaaccaatattatttgacctgctctccagcacataccatgctagaat 260

                                                                       
Query: 61  aaaatctcttaagccatgagcctgaagcactgcttcccttacattgtcaagtcatgtatt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aaaatctcttaagccatgagcctgaagcactgcttcccttacattgtcaagtcatgtatt 320

                                                                       
Query: 121 tcataacaatgattaaagaaagggattactagcaaaatgacagatgataatactgctaat 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tcataacaatgattaaagaaagggattactagcaaaatgacagatgataatactgctaat 380

                                                                       
Query: 181 tataaattgcatttatctattggtgtgggggatgagcctgtgtgtgcacatttatttatg 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tataaattgcatttatctattggtgtgggggatgagcctgtgtgtgcacatttatttatg 440

                                                                       
Query: 241 tgttctacagcttaattgcagagatcagaggacaactttcccaagagttggttttctcct 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tgttctacagcttaattgcagagatcagaggacaactttcccaagagttggttttctcct 500

                                                                       
Query: 301 cccttagttgggaaagtatctagggtcatcaggcttggcaacaagcattgttgcccactg 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 cccttagttgggaaagtatctagggtcatcaggcttggcaacaagcattgttgcccactg 560

                                                                       
Query: 361 aatgattctgctgatctacctgttttaaacaatttcagataaatatataatcacgggggt 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 aatgattctgctgatctacctgttttaaacaatttcagataaatatataatcacgggggt 620

                                                                       
Query: 421 tgtaggagctgggggcagcactggacaattgtatgacagcaagacagagagcagaaaagg 480
           ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 621 tgtaggagctgggggcagcactggacaattgtaggacagcaagacagagagcagaaaagg 680

                                                                       
Query: 481 caagatatttaaaataagccatttatgcacagcgagattatgttgttctgtttgttttct 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 caagatatttaaaataagccatttatgcacagcgagattatgttgttctgtttgttttct 740

                          
Query: 541 tttcaagagttgaga 555
           |||||||||||||||
Sbjct: 741 tttcaagagttgaga 755


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 555
Length of database: 955
Length adjustment: 10
Effective length of query: 545
Effective length of database: 945
Effective search space:   515025
Effective search space used:   515025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)