Query= MSMg01no264_f11.b1 MSMg01no264_f11.b1 CHROMAT_FILE:
MSMg01no264_f11.b1 PHD_FILE: MSMg01no264_f11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:01:29 2005
(669 letters)
>mm_chr13_119760998_119762066
Length = 1069
Score = 1249 bits (646), Expect = 0.0
Identities = 661/666 (99%), Gaps = 2/666 (0%)
Strand = Plus / Plus
Query: 5 gaattcattattac-tctttcacgcatgtatcagaatactttgttcctattcaagcccct 63
|||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcattattacat-tttcacgcatgtatcagaatactttgttcctattcaagcccct 263
Query: 64 tgctaacccccttgcccccttgacctccccattgttccaactctcccttccttaataatc 123
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 264 tgctaacccccttgcccccttgacctccccattgttccaactctcccttccgtaataatc 323
Query: 124 tcccttatgcttccatgttgcacataaggcatatatgtagttaaaatcaagattctatat 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 tcccttatgcttccatgttgcacataaggcatatatgtagttaaaatcaagattctatat 383
Query: 184 gtaaaagaaaatgttacacttgtcttccttcttatattaatttgatccctctctcttcct 243
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 gtaaaagaaaatgttacatttgtcttccttcttatattaatttgatccctctctcttcct 443
Query: 244 ttcatacactttacttcctgccctttaatatacctcattttctatattcatgtaatattt 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 ttcatacactttacttcctgccctttaatatacctcattttctatattcatgtaatattt 503
Query: 304 gtgtctatatgtctctatgtatatatttataattttatacttcaagtacaatattatttt 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 gtgtctatatgtctctatgtatatatttataattttatacttcaagtacaatattatttt 563
Query: 364 aagtgaagattcaacacaaagagaaaccatgtatttgtctttcttagtctggtttaacaa 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 aagtgaagattcaacacaaagagaaaccatgtatttgtctttcttagtctggtttaacaa 623
Query: 424 ccattatcgtgcatataacatactttaattcttccttaaggctgtatataactccagtgt 483
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 624 ccattatcgtgcatataacatactttaattcttccttaaggctgtatataactccaatgt 683
Query: 484 gtttatatgtataagtgcacattcatatctgtcttcttgacctcttattttgtggatagg 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 gtttatatgtataagtgcacattcatatctgtcttcttgacctcttattttgtggatagg 743
Query: 544 tgcctagtctgtttttgtacctacatgattgtgaataacacaacaaaggtaaacatacag 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 tgcctagtctgtttttgtacctacatgattgtgaataacacaacaaaggtaaacatacag 803
Query: 604 gtatctctgtggtatgctcatttaaaaaatatgagagtcagagataaaggaacatgctca 663
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 804 gtatctctgtggtatgctcatttaaaaaatatgagagtcagagataaaggaacatgctca 863
Query: 664 tgagaa 669
||||||
Sbjct: 864 tgagaa 869
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 669
Length of database: 1069
Length adjustment: 10
Effective length of query: 659
Effective length of database: 1059
Effective search space: 697881
Effective search space used: 697881
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no264_f11.g1 MSMg01no264_f11.g1 CHROMAT_FILE:
MSMg01no264_f11.g1 PHD_FILE: MSMg01no264_f11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:01:29 2005
(290 letters)
>mm_chr13_119899601_119900289
Length = 689
Score = 524 bits (271), Expect = e-153
Identities = 283/287 (98%), Gaps = 1/287 (0%)
Strand = Plus / Minus
Query: 1 caaaataagccagcaccacattgaaagtctattcattcaaatgacagcacttttgtggat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 486 caaaataagccagcaccacattgaaagtctattcattcaaatgacagcacttttgtggat 427
Query: 61 gtaagagtactttatccatttttatttgcagtagtatttcaggacatctgaccattcaca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 426 gtaagagtactttatccatttttatttgcagtagtatttcaggacatctgaccattcaca 367
Query: 121 agaatttcagaaatagcagcttgtgttcttaatagaagaatgtattttattatgaaccat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 366 agaatttcagaaatagcagcttgtgttcttaatagaagaatgtattttattatgaaccat 307
Query: 181 tcatttccttggaacttcagccatgtttattccataggtctttaatcatttgatatatag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 306 tcatttccttggaacttcagccatgtttattccataggtctttaatcatttgatatatag 247
Query: 241 catgttgttattgctaataaaaactgagccatctagtggtgactgat 287
||||||| | |||||||||||||||||||||||||||||||||||
Sbjct: 246 catgttg-gagggctaataaaaactgagccatctagtggtgactgat 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 290
Length of database: 689
Length adjustment: 9
Effective length of query: 281
Effective length of database: 680
Effective search space: 191080
Effective search space used: 191080
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
