Query= MSMg01no264_k22.b1 MSMg01no264_k22.b1 CHROMAT_FILE:
MSMg01no264_k22.b1 PHD_FILE: MSMg01no264_k22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:01:56 2005
(199 letters)
>mm_chr13_118674008_118674606
Length = 599
Score = 308 bits (159), Expect = 2e-88
Identities = 168/171 (98%), Gaps = 2/171 (1%)
Strand = Plus / Plus
Query: 30 ctgtgcagactattttcacaatgaaaaggtgtcaaaatatttgatga-cgaggataatca 88
|||||||||||||||||||| |||||||||||||||||||||||||| | ||||||||||
Sbjct: 230 ctgtgcagactattttcacactgaaaaggtgtcaaaatatttgatgagc-aggataatca 288
Query: 89 aattcttccataattaatcactatatttggcaagactagataatagataagtgagaatat 148
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 289 aattcttccataattaatcactatatttggcaagactagataatagataagtgagaatat 348
Query: 149 tataggtgagtgtgtctgaagatgagcaacatttaccttgaaaacgtcagc 199
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 349 tataggtgagtgtgtctgaagatgagcaacatttaccttgaaaacgtcagc 399
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 199
Length of database: 599
Length adjustment: 8
Effective length of query: 191
Effective length of database: 591
Effective search space: 112881
Effective search space used: 112881
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no264_k22.g1 MSMg01no264_k22.g1 CHROMAT_FILE:
MSMg01no264_k22.g1 PHD_FILE: MSMg01no264_k22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:01:56 2005
(288 letters)
>mm_chr13_118782190_118782878
Length = 689
Score = 536 bits (277), Expect = e-157
Identities = 286/289 (98%), Gaps = 1/289 (0%)
Strand = Plus / Minus
Query: 1 ctcatgatagagataccttatgatagagatgtaagggacactttgtgcccttttaacaca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 489 ctcatgatagagataccttatgatagagatgtaagggacactttgtgcccttttaacaca 430
Query: 61 ggagaacaaaagtagatgatcctttttatgaagcgtagcgtctgatgatatctaatctgt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 429 ggagaacaaaagtagatgatcctttttatgaagcgtagcgtctgatgatatctaatctgt 370
Query: 121 tagcatcctggttgcagatttctcagcctcccactacaagaaatattttctgatcataaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 tagcatcctggttgcagatttctcagcctcccactacaagaaatattttctgatcataaa 310
Query: 181 ttatattacagacaaaatttatgaagtaagacatgcaatatgtgtttttattatttcatt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 ttatattacagacaaaatttatgaagtaagacatgcaatatgtgtttttattatttcatt 250
Query: 241 aaaatgtaaaa-tctcccgaaacaatggtacatgtttaaaatctcagtg 288
||||||||||| | ||||||||||||||||||||||||||||||||||
Sbjct: 249 aaaatgtaaaacacacccgaaacaatggtacatgtttaaaatctcagtg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 288
Length of database: 689
Length adjustment: 9
Effective length of query: 279
Effective length of database: 680
Effective search space: 189720
Effective search space used: 189720
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
