Query= MSMg01no264_p18.b1 MSMg01no264_p18.b1 CHROMAT_FILE:
MSMg01no264_p18.b1 PHD_FILE: MSMg01no264_p18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:02:19 2005
(313 letters)
>mm_chr13_43588474_43589187
Length = 714
Score = 547 bits (283), Expect = e-160
Identities = 300/309 (97%), Gaps = 7/309 (2%)
Strand = Plus / Plus
Query: 9 gaattcagccaggtatcaagtaataacaaaccggcgggcacaaaatcagaaatcagagtg 68
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 209 gaattcagccaggtatcaagtaataacaaaccggcgggcacgaaatcagaaatcagagtg 268
Query: 69 tttacaataccctacaggacaaacagaacacctgtgcagggcagggctgaccaatgggtc 128
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 269 tttacaataccctacaggacaaacagaacacctgtgcagggcagggctgaccaatgggtc 328
Query: 129 acccgtgggtggcccaaaggctctgaattccccaagctggaaatgccagttaattacaga 188
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 329 acccgtgggtggcccaaaggctctgaattccccgagctggaaatgccagttaattacaga 388
Query: 189 aggcctggatctatcttctgtttgcctgggtcacccgggagcccaaagctggcgttgctt 248
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 389 aggcctggatctatcttctgtttgcctgggtcacccgggagcccaaagctggcgttgctt 448
Query: 249 gtctctgcctaccttggataaaacaa----ttttcagattcgccaggcatgctgccccat 304
|||||||||||||||||||||||||| | ||||||||||||||||||||||||||
Sbjct: 449 gtctctgcctaccttggataaaacaaagcat---cagattcgccaggcatgctgccccat 505
Query: 305 cctgaagaa 313
|||||||||
Sbjct: 506 cctgaagaa 514
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 313
Length of database: 714
Length adjustment: 9
Effective length of query: 304
Effective length of database: 705
Effective search space: 214320
Effective search space used: 214320
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no264_p18.g1 MSMg01no264_p18.g1 CHROMAT_FILE:
MSMg01no264_p18.g1 PHD_FILE: MSMg01no264_p18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:02:19 2005
(284 letters)
>mm_chr13_43752707_43753390
Length = 684
Score = 542 bits (280), Expect = e-158
Identities = 283/284 (99%)
Strand = Plus / Minus
Query: 1 ccacggttctgctctgaaggttaagactcctcccgagatgacagaagtccggatacaaga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 484 ccacggttctgctctgaaggttaagactcctcccgagatgacagaagtccggatacaaga 425
Query: 61 gagcacttgtaagacagagataaaggtggtcatactgcttactattccagggctctgttc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 424 gagcacttgtaagacagagataaaggtggtcatactgcttactattccagggctctgttc 365
Query: 121 tgtgttttgtgttattccaagtgaactaactgataggtagtggggtgtattctgtttctt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 364 tgtgttttgtgttattccaagtgaactaactgataggtagtggggtgtattctgtttctt 305
Query: 181 cagactatctcagggacagatttcatgtagtccgagtcatgctcacaaaggccgtcaact 240
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 304 cagactatctcagggacaggtttcatgtagtccgagtcatgctcacaaaggccgtcaact 245
Query: 241 gttagaacttggcattagtgggataggttaccattttccctgta 284
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 244 gttagaacttggcattagtgggataggttaccattttccctgta 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 284
Length of database: 684
Length adjustment: 9
Effective length of query: 275
Effective length of database: 675
Effective search space: 185625
Effective search space used: 185625
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
