Query= MSMg01no266_g07.b1 MSMg01no266_g07.b1 CHROMAT_FILE:
MSMg01no266_g07.b1 PHD_FILE: MSMg01no266_g07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:04:10 2005
(579 letters)
>mm_chr13_30916880_30917858
Length = 979
Score = 1019 bits (527), Expect = 0.0
Identities = 562/581 (96%), Gaps = 13/581 (2%)
Strand = Plus / Plus
Query: 1 tgagaccacctgccagagttaaatcacataaaatctttctagagaggagctcacaaactc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 212 tgagaccacctgccagagttaaatcacataaaatctttctagagaggagctcacaaactc 271
Query: 61 ctctgctaaaatgtgcaactgtaaggaggagacatgccctctgctttctctgctgtccgc 120
|||| ||| ||||||||||||||||| |||||||||||||||||||||||
Sbjct: 272 ctct-----------caaatgtaaggaggagacatgacctctgctttctctgctgtccgc 320
Query: 121 ccttctgcttttgctgtccttatctgtatttttccaaacaccatgatggtttccaaacct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ccttctgcttttgctgtccttatctgtatttttccaaacaccatgatggtttccaaacct 380
Query: 181 tagacatgaagctagatctcagcggaggagcacctgagcagcagtggtaaccctgttgtc 240
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 381 tagacatgaagctagagctcagcggaggagcacctgagcagcagtggtaaccctgttggc 440
Query: 241 cttgctttactttatggctcccattcttctatgagccaccttgagagtgccgccaatgtg 300
|||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||
Sbjct: 441 cttgctttactttatggctcccattcttctatgagccaccttgagagtgctggcaatgtg 500
Query: 301 tgtactggactgtaacatcattgtatgacaatgcaggtcgctgtggcacactaggtggca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tgtactggactgtaacatcattgtatgacaatgcaggtcgctgtggcacactaggtggca 560
Query: 361 gcttgttttccagtgtgcctcagaatgactcccactcctaggatgtccaggaagaatgaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gcttgttttccagtgtgcctcagaatgactcccactcctaggatgtccaggaagaatgaa 620
Query: 421 acctcagatgacaactgtgtgggacaggtgtgggaaccatgggcagtaacatcacacata 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 acctcagatgacaactgtgtgggacaggtgtgggaaccatgggcagtaacatcacacata 680
Query: 481 ccaaagcgacacacacacacacac--tcatacccatgtacacaaacacacagatgcatac 538
|||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 681 ccaaagcgacacacacacacacacactcatacccatgtacacaaacacacagatgcatac 740
Query: 539 acacagacacaacaagcaattgcacagagacacacctgcac 579
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 acacagacacaacaagcaattgcacagagacacacctgcac 781
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 579
Length of database: 979
Length adjustment: 10
Effective length of query: 569
Effective length of database: 969
Effective search space: 551361
Effective search space used: 551361
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no266_g07.g1 MSMg01no266_g07.g1 CHROMAT_FILE:
MSMg01no266_g07.g1 PHD_FILE: MSMg01no266_g07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:04:10 2005
(286 letters)
>mm_chr13_31065562_31066247
Length = 686
Score = 518 bits (268), Expect = e-151
Identities = 280/284 (98%)
Strand = Plus / Minus
Query: 1 cacccttccactttctccctctcctcctttctgcttccctccttctttcctccctttccc 60
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 664 cacccttccactttctccctctcctcctttctgcttccctccttcttttctccctttccc 605
Query: 61 atcaattcctcttctcctttccacctctccacccttctctcctcctccctcccccctttc 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 604 atcaattcctcttctcctttccacctctccacccttctctcctcctccctccccactttc 545
Query: 121 cctttcttccttctctgtccacttccatgccgtcgatatcctctaacttcccttctccac 180
|||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 544 cctttcttccctctctgtccacttccatgccgtcgatatcctctaacttcccttctccat 485
Query: 181 agtctggtcctccttctattccttcccctctgggaagaggcggtccatccagcactcggt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 484 agtctggtcctccttctattccttcccctctgggaagaggcggtccatccagcactcggt 425
Query: 241 gctcggctaggcggcggatcgacgcgctcggcgctcgcggcgtg 284
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 424 gctcggctaggcggcggatcgacgcgctcggcgctcgcggcgtg 381
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 286
Length of database: 686
Length adjustment: 9
Effective length of query: 277
Effective length of database: 677
Effective search space: 187529
Effective search space used: 187529
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
