Query= MSMg01no267_m20.b1 MSMg01no267_m20.b1 CHROMAT_FILE:
MSMg01no267_m20.b1 PHD_FILE: MSMg01no267_m20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:05:57 2005
(320 letters)
>mm_chr13_74259515_74260234
Length = 720
Score = 588 bits (304), Expect = e-172
Identities = 316/324 (97%), Gaps = 7/324 (2%)
Strand = Plus / Plus
Query: 4 ggaattcgttagacccttattcaagggagagcaagaacagatacagaggttcctagcctg 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattcgttagacccttattcaagggagagcaagaacagatacagaggttcctagcctg 263
Query: 64 cccgtttcctttaaggttatggaatagaagaagcagaagaggccttccttccttccaaga 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 cccgtttcctttaaggttatggaatagaagaagcagaagaggccttccttccttccaaga 323
Query: 124 tccaggagggagcacgcctctttagcaggacaggggagggaaagctgtgaagggaataag 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 tccaggagggagcacgcctctttagcaggacaggggagggaaagctgtgaagggaataag 383
Query: 184 gttaacagagctcagactcacagtgcctggttagggaaggcttttttttttttttttttt 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 gttaacagagctcagactcacagtgcctggttagggaaggcttttttttttttttttttt 443
Query: 244 ttttttttttatt-------tcttgctgcctcctcttcccattcatttaacccggggatc 296
||||||||||||| |||||||||||||||||||||||||||||||||| |||||
Sbjct: 444 ttttttttttattatttatttcttgctgcctcctcttcccattcatttaacccgtggatc 503
Query: 297 tggcactaggctctccttgcatct 320
||||||||||||||||||||||||
Sbjct: 504 tggcactaggctctccttgcatct 527
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 37
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 320
Length of database: 720
Length adjustment: 9
Effective length of query: 311
Effective length of database: 711
Effective search space: 221121
Effective search space used: 221121
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no267_m20.g1 MSMg01no267_m20.g1 CHROMAT_FILE:
MSMg01no267_m20.g1 PHD_FILE: MSMg01no267_m20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:05:57 2005
(352 letters)
>mm_chr13_74421818_74422569
Length = 752
Score = 584 bits (302), Expect = e-171
Identities = 328/338 (97%), Gaps = 6/338 (1%)
Strand = Plus / Minus
Query: 18 cgtttcatttaagttgttgaatttat--ggaaaaattatttgtcctagtgtgcttgggta 75
||||||||||||||||| |||||||| || ||||||||||||||||||||||||||||
Sbjct: 752 cgtttcatttaagttgtggaatttataggg--aaattatttgtcctagtgtgcttgggta 695
Query: 76 accatggcaaaatatcacagattaggtagattaagggcaaaccttcctttcctacagttc 135
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 694 accatggcaaaatatcacagattaggtagattaagggcaaaccttcctttcctacagttc 635
Query: 136 tagaagatggaaggccaagatgctgtttctggtgagagtatctttctggctggtggatag 195
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 634 tagaagatggaaggccaagatgctgtttctggtgagagtatctttctggctggtggatag 575
Query: 196 ccttgttttctttttatcctcattaagtggtgagagaaagagccccagtgccttttgctg 255
|||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||
Sbjct: 574 ccttgttttctttttatccttattaagtggcgagagaaagagccccagtgccttttgctg 515
Query: 256 tttcctatgagcacaactctgtggaactacagtat-tttcccagtgacctcactttctta 314
|||||||||||||||| |||||||||||||||| | ||||||||||||||||||||||||
Sbjct: 514 tttcctatgagcacaaatctgtggaactacagt-tgtttcccagtgacctcactttctta 456
Query: 315 gtcacctccattcacacccccatgtccatgcagagagt 352
||||||||||||||||||||||||||||||||||||||
Sbjct: 455 gtcacctccattcacacccccatgtccatgcagagagt 418
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 352
Length of database: 752
Length adjustment: 9
Effective length of query: 343
Effective length of database: 743
Effective search space: 254849
Effective search space used: 254849
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
