Query= MSMg01no269_f03.b1 MSMg01no269_f03.b1 CHROMAT_FILE:
MSMg01no269_f03.b1 PHD_FILE: MSMg01no269_f03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:07:45 2005
(351 letters)
>mm_chr13_106651190_106651940
Length = 751
Score = 621 bits (321), Expect = 0.0
Identities = 342/349 (97%), Gaps = 2/349 (0%)
Strand = Plus / Plus
Query: 4 aaatgtaagcaagtcaaaatatataacacttttcaggactggtaggctaacagataagac 63
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 204 aaatgtaagcaagtcaaaatatataacacttttcaggactggtaggctatcagataagac 263
Query: 64 caaatctaaaggctctctaatgaaactcctccgtttccttctctttttcttcctaataga 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 caaatctaaaggctctctaatgaaactcctccgtttccttctctttttcttcctaataga 323
Query: 124 ttttg-ttccaccttcattattacagttttcctaactttttagcttgaaaatgtatctag 182
||||| |||| ||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 324 ttttgcttcc-ccttcattattacagttttcctagctttttagcttgaaaatgtatctag 382
Query: 183 ccatgtaaataacaccgaaaactacctttaatttgttcacaaggcaagagaaaccaaaaa 242
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 ccatgtaaataacacccaaaactacctttaatttgttcacaaggcaagagaaaccaaaag 442
Query: 243 aagaaaggaaggatggaaaaaaaggaaaataacactttaaagtatctccttcaatatttc 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 aagaaaggaaggatggaaaaaaaggaaaataacactttaaagtatctccttcaatatttc 502
Query: 303 tgaacaaaatgacaagttcatttttgaactgcacacactgtatatggga 351
||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 503 tgaacaaaatgacaagttcatttttgaactgcacacattgtatatggga 551
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 351
Length of database: 751
Length adjustment: 9
Effective length of query: 342
Effective length of database: 742
Effective search space: 253764
Effective search space used: 253764
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no269_f03.g1 MSMg01no269_f03.g1 CHROMAT_FILE:
MSMg01no269_f03.g1 PHD_FILE: MSMg01no269_f03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:07:45 2005
(211 letters)
>mm_chr13_106819126_106819736
Length = 611
Score = 335 bits (173), Expect = 2e-96
Identities = 200/209 (95%), Gaps = 2/209 (0%)
Strand = Plus / Minus
Query: 1 agtactagggatgagagtccctcttgtgggtgtggacccaaagcttactcaagaacattc 60
|||||||||||||||| |||||||||||||||||| | ||||||||||||||||||||||
Sbjct: 408 agtactagggatgagattccctcttgtgggtgtggtcgcaaagcttactcaagaacattc 349
Query: 61 aagtgtaggattagagatatttatataccttataggagaaaaactttttcctcaaattta 120
|||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||
Sbjct: 348 aagtgtaggattagagatttttatataccttataagagaaaaactttttcctcaaattta 289
Query: 121 agttcagtaaattcaggagccaaatgattgtgaagaagtcaaaactacaact-accccaa 179
| |||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||
Sbjct: 288 atttcagtaaattcaggagccaaatgattgtgaagaagtcaaaactacaacttaccc-aa 230
Query: 180 tcttccattatctcctttaaatgatgaat 208
||||||||||||| |||||||||||||||
Sbjct: 229 tcttccattatcttctttaaatgatgaat 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 211
Length of database: 611
Length adjustment: 9
Effective length of query: 202
Effective length of database: 602
Effective search space: 121604
Effective search space used: 121604
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
