Query= MSMg01no274_m11.b1 MSMg01no274_m11.b1 CHROMAT_FILE:
MSMg01no274_m11.b1 PHD_FILE: MSMg01no274_m11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:14:23 2005
(239 letters)
>mm_chr13_39557054_39557693
Length = 640
Score = 404 bits (209), Expect = e-117
Identities = 237/257 (92%), Gaps = 18/257 (7%)
Strand = Plus / Plus
Query: 1 acaggcatgtgccatcacacttaaccctgaagacacttcaagtgtaggttctgtgctctc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 184 acaggcatgtgccatcacacttaaccctgaagacacttcaagtgtaggttctgtgctctc 243
Query: 61 atcc-----------------cattgaatagcctcttttcc-ttgaacactgtttaccat 102
|||| |||||||||||||||||||| ||||||||||||||||||
Sbjct: 244 atcctgctacaggctacatgtcattgaatagcctcttttcctttgaacactgtttaccat 303
Query: 103 acaaagttatttggatagactgcgatttatggtagcattgtcttagaagaacttaagtcc 162
||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 304 acaaagtgatttggatagactacgatttatggtagcattgtcttagaagaacttaagtcc 363
Query: 163 aaatttcaatatttgccaagtcgttgctccagtgttctgagctatatatatatatatata 222
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 364 aaatttcaatatttgccaagtcgttgctccagtgttctgagctatatatatatatatata 423
Query: 223 tatatatatatatatat 239
|||||||||||||||||
Sbjct: 424 tatatatatatatatat 440
Score = 68.4 bits (35), Expect = 4e-16
Identities = 35/35 (100%)
Strand = Plus / Minus
Query: 205 tatatatatatatatatatatatatatatatatat 239
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Sbjct: 449 tatatatatatatatatatatatatatatatatat 415
Score = 68.4 bits (35), Expect = 4e-16
Identities = 35/35 (100%)
Strand = Plus / Minus
Query: 205 tatatatatatatatatatatatatatatatatat 239
|||||||||||||||||||||||||||||||||||
Sbjct: 451 tatatatatatatatatatatatatatatatatat 417
Score = 68.4 bits (35), Expect = 4e-16
Identities = 35/35 (100%)
Strand = Plus / Minus
Query: 205 tatatatatatatatatatatatatatatatatat 239
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Sbjct: 453 tatatatatatatatatatatatatatatatatat 419
Score = 66.5 bits (34), Expect = 1e-15
Identities = 34/34 (100%)
Strand = Plus / Minus
Query: 205 tatatatatatatatatatatatatatatatata 238
||||||||||||||||||||||||||||||||||
Sbjct: 439 tatatatatatatatatatatatatatatatata 406
Score = 66.5 bits (34), Expect = 1e-15
Identities = 34/34 (100%)
Strand = Plus / Minus
Query: 206 atatatatatatatatatatatatatatatatat 239
||||||||||||||||||||||||||||||||||
Sbjct: 454 atatatatatatatatatatatatatatatatat 421
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 66
Number of extensions: 34
Number of successful extensions: 23
Number of sequences better than 10.0: 1
Number of HSP's gapped: 18
Number of HSP's successfully gapped: 7
Length of query: 239
Length of database: 640
Length adjustment: 9
Effective length of query: 230
Effective length of database: 631
Effective search space: 145130
Effective search space used: 145130
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
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