Query= MSMg01no274_p13.b1 MSMg01no274_p13.b1 CHROMAT_FILE:
MSMg01no274_p13.b1 PHD_FILE: MSMg01no274_p13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:14:37 2005
(297 letters)
>mm_chr13_48192574_48193270
Length = 697
Score = 553 bits (286), Expect = e-162
Identities = 292/294 (99%)
Strand = Plus / Minus
Query: 1 gaaatgccatctaaatatagggagggaaaagactcttgcgcacagctccttctactcccc 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 356 gaaatgccatctaaatatagggagggaaaagactcttgcgcacagctccttctaatcccc 297
Query: 61 atgggatcactgaggagggtgggtggcatctgtgtcttaaccagtgaggtcatcgaaact 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 296 atgggatcactgaggagggtgggtggcatctgtgtcttaaccagtgaggtcatcgaaact 237
Query: 121 tacagacactcaagaagtttctgtcctgggaaaagtgggggagggggcgaggggagggac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 236 tacagacactcaagaagtttctgtcctgggaaaagtgggggagggggcgaggggagggac 177
Query: 181 gcagagggggtgggggagatggtaacacaccgatctagagtctgcctgggatctcttgac 240
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 176 gcagagggggtgggggggatggtaacacaccgatctagagtctgcctgggatctcttgac 117
Query: 241 tggaagactggctctttgtactttggcacatctttctggtctctcttctctgcg 294
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 116 tggaagactggctctttgtactttggcacatctttctggtctctcttctctgcg 63
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 297
Length of database: 697
Length adjustment: 9
Effective length of query: 288
Effective length of database: 688
Effective search space: 198144
Effective search space used: 198144
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no274_p13.g1 MSMg01no274_p13.g1 CHROMAT_FILE:
MSMg01no274_p13.g1 PHD_FILE: MSMg01no274_p13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:14:37 2005
(309 letters)
>mm_chr13_48091819_48092527
Length = 709
Score = 551 bits (285), Expect = e-161
Identities = 295/299 (98%), Gaps = 2/299 (0%)
Strand = Plus / Plus
Query: 1 gttccccattgctttggagctgtggtagtccattaccatggggaatgcatgcctagcaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gttccccattgctttggagctgtggtagtccattaccatggggaatgcatgcctagcaaa 260
Query: 61 gctactcagttcctagccaggaagagaaaggaaggcagaagaatggggatggatcgctag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gctactcagttcctagccaggaagagaaaggaaggcagaagaatggggatggatcgctag 320
Query: 121 gcacttaaacatcaggccacatctcttaaaagtgccacaacctcctaaagtcaccatttc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gcacttaaacatcaggccacatctcttaaaagtgccacaacctcctaaagtcaccatttc 380
Query: 181 agagaagtcatcttcagcactcgggcttttaggagaagtttcaggtgcagaacataccgt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agagaagtcatcttcagcactcgggcttttaggagaagtttcaggtgcagaacataccgt 440
Query: 241 gtatgtgcctctgtgtgtgtgtgtgcctgtgtgcgtgtgc--gtgtgcgtgtgtgtgtg 297
||||||||||||||||||||||||||||||||| |||||| ||||||||||| |||||
Sbjct: 441 gtatgtgcctctgtgtgtgtgtgtgcctgtgtgtgtgtgcctgtgtgcgtgtgcgtgtg 499
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 3
Number of HSP's successfully gapped: 1
Length of query: 309
Length of database: 709
Length adjustment: 9
Effective length of query: 300
Effective length of database: 700
Effective search space: 210000
Effective search space used: 210000
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
