Query= MSMg01no276_a18.b1 MSMg01no276_a18.b1 CHROMAT_FILE:
MSMg01no276_a18.b1 PHD_FILE: MSMg01no276_a18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:15:54 2005
(373 letters)
>mm_chr13_103682557_103683329
Length = 773
Score = 702 bits (363), Expect = 0.0
Identities = 369/371 (99%)
Strand = Plus / Minus
Query: 3 taacacttgagccctttctaaggagttgcttcccctttctaaagaccatagaaggtaact 62
||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 573 taacatttgagccctttctaaggagttgcttcccctttctaaagaccgtagaaggtaact 514
Query: 63 tactttgggatgctttttaactgataaaggtgttttcatggtcagttctggtgacttcac 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 513 tactttgggatgctttttaactgataaaggtgttttcatggtcagttctggtgacttcac 454
Query: 123 ataaggggctaatgtagaattaacttaatgtagagaaagaaagtccagacagcaaagtgt 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 453 ataaggggctaatgtagaattaacttaatgtagagaaagaaagtccagacagcaaagtgt 394
Query: 183 gtttcattttgctctgaaatcatgttggtaaatagatactttatagatggccaagtttgc 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 393 gtttcattttgctctgaaatcatgttggtaaatagatactttatagatggccaagtttgc 334
Query: 243 tctttacatatggtgttaccctaagctttaacaattaactgacatgtcactaattccaaa 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 333 tctttacatatggtgttaccctaagctttaacaattaactgacatgtcactaattccaaa 274
Query: 303 aggaatatatagaatgtttctgttacctctagttttaaatatttcaatagtgtgagcatg 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 273 aggaatatatagaatgtttctgttacctctagttttaaatatttcaatagtgtgagcatg 214
Query: 363 ttaatataaaa 373
|||||||||||
Sbjct: 213 ttaatataaaa 203
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 373
Length of database: 773
Length adjustment: 9
Effective length of query: 364
Effective length of database: 764
Effective search space: 278096
Effective search space used: 278096
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no276_a18.g1 MSMg01no276_a18.g1 CHROMAT_FILE:
MSMg01no276_a18.g1 PHD_FILE: MSMg01no276_a18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:15:54 2005
(364 letters)
>mm_chr13_103520392_103521159
Length = 768
Score = 617 bits (319), Expect = 0.0
Identities = 355/369 (96%), Gaps = 6/369 (1%)
Strand = Plus / Plus
Query: 1 ataaaatgcatgcatctcagcaggaagaattatggtatgcaagcaaaaaaaaaattgttg 60
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ataaaatg-atgcatctcagcaggaagaattatggtatgcaagcaaaaaaaaaattgttg 259
Query: 61 tgattctgacccctttcagattctgatttacaaaaaggaaggtgga---agaaagacctg 117
|||||||||||||||||||||||||||||||||||||||||||||| || ||||| ||
Sbjct: 260 tgattctgacccctttcagattctgatttacaaaaaggaaggtggattcaggaagacttg 319
Query: 118 gctggaggtagattgcaagtgtgtgctgcccagtgagtgtgcagaaggtcaactcctaag 177
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 gctggaggtagattgcaagtgtgtgctgcccagtgagtgtgcagaaggtcaactcctaag 379
Query: 178 cctgtaagtcaaggttaggctgcctcttaac--ctgtcttctgggtcgtggttacttaat 235
||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||
Sbjct: 380 cctgtaagtcaaggttaggctgcctcttaacctctgtcttctgggccgtggttacttaat 439
Query: 236 ggctatgatgaaagagcatagaactcaaggatggacgcacagattgaataaggtttgcat 295
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 440 ggctatgatgaaagagcatagaactcaaggatggacgctcagattgaataaggtttgcac 499
Query: 296 ctagtatagaatgtggtaatctgatgaagtagccacaaaaatgataggcactattaacat 355
|||||||| ||||||| | |||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 ctagtatataatgtggcactctgatgaagtagccacaaaaatgataggcactattaacat 559
Query: 356 tttttttct 364
|||||||||
Sbjct: 560 tttttttct 568
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 364
Length of database: 768
Length adjustment: 9
Effective length of query: 355
Effective length of database: 759
Effective search space: 269445
Effective search space used: 269445
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
