TCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCTCCAAAATACCGCATTTCTTATAATCTTCATGATACAAACAAGAG
TAAGATGTGCATCAGGATTGTCCCGTAGTCAAACCAATGACCAGGAATCT
GATCTTATGAAAGAGCACGCTGTTCTCTTGTCATGAGTCATCATGGAAAG
AGATAAAGGAAAAGAGAGCGGGGCCATGATGAAATTGCTTTAGTGCAGTT
CACAAAGTTACGTCTGTGCATCCCTCCGGTTCTATTTTATGATATTCTTT
AAGCAAATCTAACATTGCCTTACATACTGGAGTGGCCACAGGTAGCTTTT
TTGATAGGGTCTCTCTTTCTACCCCGCCCTGTCCTCACAACCAAAGTAGT
GTGCTCATAACACCATCTTATGAGAAAGAACCCCAGTTAGGTTCATTTGA
TTATTAAAGACCATGGTAGATATGGACCCCTGGCTATGTGCAAAACTTCA
TTTTGTTTTAGATCAAGACAAGCCTTTTCATTGTCTGTGTCAGAGGACAG
GATGACATATTACTGTGATCATTGAATGTATTTATTCAACTCCCTTTGAT
ATAATGAACTTGAAACTTGTAAACTAAAAAAAGGTGCCTGAGACTTTCTT
CACCATCTGGACGACTTGCAAAGATGTGCTGTTACCCTAGATTGGTGGAA
GGGACAGAAGTGCCCTA

CGATGACXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXTTTGATTTCTCTACAGTGCACAATG
ACTAGACCTGTGGTGCCCCAGAGCTCAAGGATGCTGGAGTCCCACGGGGG
ACAGCGGGACTGTTCACGTGCCCAGCCAGTCCAGTGGCCCACTCTGCTCT
AAAACAGACCAAGTCGTTGTAGCTTCTAGGTTAGACCTAATTGACCAGAC
CCTGTGTGTACCCTCTCTTTGAATGAGATCCATCCTCGGAGTGATGTTGA
ACATGAGGATGCTGCTGTGGCAAGGATACTAGTAGAGCATCTTGCTTTCT
TTCCTGCTACTCTTTATATCCACTGCTACCCAGGCAAACAAGGACCACCC
TTTTGGAGATTTTCAAGCAATGTCCCCCAAGGCCTCAAACCTTAAAGGGC
AAGCATGACAGCATATGTGTCCTTAAATGTAATGGACCAAGTGAAACCCA
GTAAGTGACTCTAGCTGGTAATACACCAATATCAATTTAATGTTAGATTA
TCGTTAGGATGTTTTCTCCAGGGCAGTGGAATAGATGACAGTCGGGAAAG
ATTTCCTGTTCAGTTTTCTCTCATGATAAACCTGAAACATACTGTCAAAA
ATTTAGATTCCATTGTAGGACGGTATTTAGTGACTGGATTTTTATCAGGT
TTCTAAATCTATGCCTTGA

Query= MSMg01no277_i10.b1 MSMg01no277_i10.b1 CHROMAT_FILE:
MSMg01no277_i10.b1 PHD_FILE: MSMg01no277_i10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:17:41 2005
         (234 letters)



>mm_chr13_42716614_42717247
          Length = 634

 Score =  445 bits (230), Expect = e-129
 Identities = 233/234 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   agtcaaaccaatgaccaggaatctgatcttatgaaagagcacgctgttctcttgtcatga 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 434 agtcaaaccaatgaccaggaatctgatcttatgaaagagcacgctgttctcttgtcatga 375

                                                                       
Query: 61  gtcatcatggaaagagataaaggaaaagagagcggggccatgatgaaattgctttagtgc 120
           ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 374 gtcatcatggaaagagataaagggaaagagagcggggccatgatgaaattgctttagtgc 315

                                                                       
Query: 121 agttcacaaagttacgtctgtgcatccctccggttctattttatgatattctttaagcaa 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314 agttcacaaagttacgtctgtgcatccctccggttctattttatgatattctttaagcaa 255

                                                                 
Query: 181 atctaacattgccttacatactggagtggccacaggtagcttttttgatagggt 234
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 254 atctaacattgccttacatactggagtggccacaggtagcttttttgatagggt 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 234
Length of database: 634
Length adjustment: 9
Effective length of query: 225
Effective length of database: 625
Effective search space:   140625
Effective search space used:   140625
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)

Query= MSMg01no277_i10.g1 MSMg01no277_i10.g1 CHROMAT_FILE:
MSMg01no277_i10.g1 PHD_FILE: MSMg01no277_i10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:17:41 2005
         (288 letters)



>mm_chr13_42661146_42661833
          Length = 688

 Score =  551 bits (285), Expect = e-161
 Identities = 285/285 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   tttgatttctctacagtgcacaatgactagacctgtggtgccccagagctcaaggatgct 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tttgatttctctacagtgcacaatgactagacctgtggtgccccagagctcaaggatgct 260

                                                                       
Query: 61  ggagtcccacgggggacagcgggactgttcacgtgcccagccagtccagtggcccactct 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ggagtcccacgggggacagcgggactgttcacgtgcccagccagtccagtggcccactct 320

                                                                       
Query: 121 gctctaaaacagaccaagtcgttgtagcttctaggttagacctaattgaccagaccctgt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gctctaaaacagaccaagtcgttgtagcttctaggttagacctaattgaccagaccctgt 380

                                                                       
Query: 181 gtgtaccctctctttgaatgagatccatcctcggagtgatgttgaacatgaggatgctgc 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gtgtaccctctctttgaatgagatccatcctcggagtgatgttgaacatgaggatgctgc 440

                                                        
Query: 241 tgtggcaaggatactagtagagcatcttgctttctttcctgctac 285
           |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tgtggcaaggatactagtagagcatcttgctttctttcctgctac 485


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 288
Length of database: 688
Length adjustment: 9
Effective length of query: 279
Effective length of database: 679
Effective search space:   189441
Effective search space used:   189441
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)