Query= MSMg01no277_p21.b1 MSMg01no277_p21.b1 CHROMAT_FILE:
MSMg01no277_p21.b1 PHD_FILE: MSMg01no277_p21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:18:13 2005
(295 letters)
>mm_chr13_42608592_42609287
Length = 696
Score = 534 bits (276), Expect = e-156
Identities = 291/296 (98%), Gaps = 1/296 (0%)
Strand = Plus / Minus
Query: 1 ccacaatgacctattaagaagtcgatgccaaggatccaggaaaaggctgtttccctggac 60
|||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||
Sbjct: 496 ccacaatgacctattaagaagtcgatgccaaggatccaggaaaaggctgttttcttggac 437
Query: 61 tctgctataaagccaggaagggaggggtggctaaaccttacaggtttgatttaatgacca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 436 tctgctataaagccaggaagggaggggtggctaaaccttacaggtttgatttaatgacca 377
Query: 121 tgctgagtagcttatgtgaaaaagtggtgggaaaatttttaatgtggtgtat-aatttat 179
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 376 tgctgagtagcttatgtgaaaaagtggtgggaaaatttttaatgtggtgtattaatttat 317
Query: 180 tatcacgtgattagatttgatgtcaggaagccaactccagaagcagtagtagctcctgac 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 316 tatcacgtgattagatttgatgtcaggaagccaactccagaagcagtagtagctcctgac 257
Query: 240 tgagtctgttagaaagagtgttacaggcactcttggtattcttctaaatcctcttg 295
|||||||||||||||||||||||||||| |||||||||||| ||||||||||||||
Sbjct: 256 tgagtctgttagaaagagtgttacaggctctcttggtattcatctaaatcctcttg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 295
Length of database: 696
Length adjustment: 9
Effective length of query: 286
Effective length of database: 687
Effective search space: 196482
Effective search space used: 196482
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no277_p21.g1 MSMg01no277_p21.g1 CHROMAT_FILE:
MSMg01no277_p21.g1 PHD_FILE: MSMg01no277_p21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:18:13 2005
(293 letters)
>mm_chr13_42434229_42434921
Length = 693
Score = 559 bits (289), Expect = e-164
Identities = 292/293 (99%)
Strand = Plus / Plus
Query: 1 ttatcttctgggagaacgaaattcaatgaaccaacaaaggcagcaatgggctcttatcgg 60
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 201 ttatcttctgggagaacgaaattcaatgaaccaacaaaggcagcaatgggctattatcgg 260
Query: 61 agcccttcaaggctcttcaaaacactgtactcacagtggaaacgcaaatccctctgaccc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agcccttcaaggctcttcaaaacactgtactcacagtggaaacgcaaatccctctgaccc 320
Query: 121 ttcagggtttataagggaagttctgagcttctcaagggtcaaccaggcagagattcttgt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttcagggtttataagggaagttctgagcttctcaagggtcaaccaggcagagattcttgt 380
Query: 181 tggctcccttgtcaaagtttgagagggtgagcacagtgaagaaaggccccacaggtcacc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tggctcccttgtcaaagtttgagagggtgagcacagtgaagaaaggccccacaggtcacc 440
Query: 241 tcccctgggcagggaatgcacagctggcctgtgctgcagatagcacagggcat 293
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tcccctgggcagggaatgcacagctggcctgtgctgcagatagcacagggcat 493
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 293
Length of database: 693
Length adjustment: 9
Effective length of query: 284
Effective length of database: 684
Effective search space: 194256
Effective search space used: 194256
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|