Query= MSMg01no280_e03.b1 MSMg01no280_e03.b1 CHROMAT_FILE:
MSMg01no280_e03.b1 PHD_FILE: MSMg01no280_e03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:21:03 2005
(336 letters)
>mm_chr13_44779621_44780357
Length = 737
Score = 629 bits (325), Expect = 0.0
Identities = 335/339 (98%), Gaps = 4/339 (1%)
Strand = Plus / Minus
Query: 1 cacctaggtttatttattaacttacttatttcacagtcctagattgagctcacgctcttc 60
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 394 cacctaggtttatttattaacttacttatttcacagtcctagattgagctca-gctcttc 336
Query: 61 attcatactaagcaagtactcttccaactcacctctgtctttattttcccattgatagtt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 335 attcatactaagcaagtactcttccaactcacctctgtctttattttcccattgatagtt 276
Query: 121 ttttaata--agttatctatttatgtgcgtgcacatgatacagcttgcaggtggatgtaa 178
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 275 ttttaataatagttatctatttatgtgcgtgcacatgatacagcttgcaggtggatgtaa 216
Query: 179 gaggacaccttatggcactggttctcagtcttcctaattctgtcaccctcaagtcgtggt 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 215 gaggacaccttatggcactggttctcagtcttcctaattctgtcaccctcaagtcgtggt 156
Query: 239 ga-cccccccacacaccataaaaccattttgttgttacttgacaactgtcatttaattac 297
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 155 gaccccccccacacaccataaaaccattttgttgttacttgacaactgtcatttaattac 96
Query: 298 cgatatgaaccataatgtaaatatctgatatgcaggata 336
|||||||||||||||||||||||||||||||||||||||
Sbjct: 95 cgatatgaaccataatgtaaatatctgatatgcaggata 57
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 336
Length of database: 737
Length adjustment: 9
Effective length of query: 327
Effective length of database: 728
Effective search space: 238056
Effective search space used: 238056
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no280_e03.g1 MSMg01no280_e03.g1 CHROMAT_FILE:
MSMg01no280_e03.g1 PHD_FILE: MSMg01no280_e03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:21:03 2005
(284 letters)
>mm_chr13_44618719_44619402
Length = 684
Score = 503 bits (260), Expect = e-147
Identities = 278/284 (97%)
Strand = Plus / Plus
Query: 1 catagtccctgattccctctctggcaatttcacaatcagagcatagcccgtcttactgac 60
|||||||||||||||||||||||| |||||||||||||| ||| || |||||||||||
Sbjct: 201 catagtccctgattccctctctgggaatttcacaatcagggcagagtgagtcttactgac 260
Query: 61 agacagaagtccaggaccaggggaaactcttgagacacacactgtcgtaagactatctcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agacagaagtccaggaccaggggaaactcttgagacacacactgtcgtaagactatctcc 320
Query: 121 catctatgttcctcagggcctgcttatctttcctaaaagccatttgtttctccataagta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 catctatgttcctcagggcctgcttatctttcctaaaagccatttgtttctccataagta 380
Query: 181 cacccccttctgcaattaagatgttacatgtgccctaaatcctaacagcttcttcgagtc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cacccccttctgcaattaagatgttacatgtgccctaaatcctaacagcttcttcgagtc 440
Query: 241 acattcttccgtgacctcctgtgtgctcacataaataaatagtt 284
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 acattcttccgtgacctcctgtgtgctcacataaataaatagtt 484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 284
Length of database: 684
Length adjustment: 9
Effective length of query: 275
Effective length of database: 675
Effective search space: 185625
Effective search space used: 185625
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
