Query= MSMg01no280_p10.b1 MSMg01no280_p10.b1 CHROMAT_FILE:
MSMg01no280_p10.b1 PHD_FILE: MSMg01no280_p10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:21:56 2005
(384 letters)
>mm_chr13_88648150_88648933
Length = 784
Score = 611 bits (316), Expect = e-179
Identities = 355/382 (92%), Gaps = 24/382 (6%)
Strand = Plus / Plus
Query: 1 tttattttaactcaatttttagttctcagaatgaaaattaaggaattatacctgattgat 60
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 201 tttattttaactcaatttttagttctcagaatgaaaattaaggaattataccagattgat 260
Query: 61 aaatatactttcaaggaacaatcaaagagacttgtttcagaattatcttttaaattaaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aaatatactttcaaggaacaatcaaagagacttgtttcagaattatcttttaaattaaaa 320
Query: 121 gtatgaatatttatctgtaaatatatatgtacagacacatacatacatgagatcatttct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gtatgaatatttatctgtaaatatatatgtacagacacatacatacatgagatcatttct 380
Query: 181 agactgggtaaactaaggtgggggaactcatttatcaatgggcagtaccatttcttacat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agactgggtaaactaaggtgggggaactcatttatcaatgggcagtaccatttcttacat 440
Query: 241 tggggtttctgagtgagaaagaaagaaagagagacagagagagagagagaggaaggaagg 300
|||||||||||||||||||||||||| |||||||||||| ||||||
Sbjct: 441 tggggtttctgagtgagaaagaaaga--------------gagagagagagg--ggaagg 484
Query: 301 aaggaaggaaggaaggaaggaaggaaggaaggaaggaaggaaggaaggaaggaaggaagg 360
|||||||||||||||||||||||||||||||||||||||||||||||| ||| |||
Sbjct: 485 aaggaaggaaggaaggaaggaaggaaggaaggaaggaaggaaggaagggagggagg---- 540
Query: 361 aagagagagagtgagatagaga 382
||||||||||||||||||
Sbjct: 541 ----gagagagtgagatagaga 558
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 81
Number of extensions: 19
Number of successful extensions: 19
Number of sequences better than 10.0: 1
Number of HSP's gapped: 13
Number of HSP's successfully gapped: 1
Length of query: 384
Length of database: 784
Length adjustment: 9
Effective length of query: 375
Effective length of database: 775
Effective search space: 290625
Effective search space used: 290625
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no280_p10.g1 MSMg01no280_p10.g1 CHROMAT_FILE:
MSMg01no280_p10.g1 PHD_FILE: MSMg01no280_p10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:21:56 2005
(234 letters)
>mm_chr13_88799382_88800015
Length = 634
Score = 445 bits (230), Expect = e-129
Identities = 233/234 (99%)
Strand = Plus / Minus
Query: 1 atgagcaataacatacacactcacaaacaaacgtaaacaaatatgtaatattattaaaga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 434 atgagcaataacatacacactcacaaacaaacgtaaacaaatatgtaatattattaaaga 375
Query: 61 tgttttctatttgaatgacattatcaggtctttattgcctttcttctctctacttcctct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 374 tgttttctatttgaatgacattatcaggtctttattgcctttcttctctctacttcctct 315
Query: 121 ttctatcaatttggctttttattcatttatttatagacatattaattttttctgggggaa 180
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 314 ttctatcaatttggctttttattcatttatttatagacattttaattttttctgggggaa 255
Query: 181 tttgttccgttcaaagatgatttttaatatttattcacattattctgaaaaata 234
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 254 tttgttccgttcaaagatgatttttaatatttattcacattattctgaaaaata 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 234
Length of database: 634
Length adjustment: 9
Effective length of query: 225
Effective length of database: 625
Effective search space: 140625
Effective search space used: 140625
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
