Query= MSMg01no289_p01.b1 MSMg01no289_p01.b1 CHROMAT_FILE:
MSMg01no289_p01.b1 PHD_FILE: MSMg01no289_p01.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:24:21 2005
(573 letters)
>mm_chr13_57922844_57923816
Length = 973
Score = 1046 bits (541), Expect = 0.0
Identities = 562/569 (98%)
Strand = Plus / Minus
Query: 4 gtggttcacatctgtccaaacctacttacctagaggagagtgctccttttatcagtctgc 63
|||||||||||||| |||| ||||||||||||||||||| ||||||||||||||||||||
Sbjct: 772 gtggttcacatctgcccaagcctacttacctagaggagaatgctccttttatcagtctgc 713
Query: 64 caggaattctgaagacttgccctgctggagccttcaagtacaagggcagaagctttgagt 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 712 caggaattctgaagacttgccctgctggagccttcaagtacaagggcagaagctttgagt 653
Query: 124 ttaattgctgatggttatggtcctctggcccccaagcgttgggcaacctgcctgttaaat 183
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 652 ctaattgctgatggttatggtcctctggcccccaagcgttgggcaacctgcctgttaaat 593
Query: 184 gttttaggcactgataagccaaattgctggggaagtagtgtctgctctgaccccagccct 243
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 592 gttttaggcactgataagccaaattgctggggaagtggtgtctgctctgaccccagccct 533
Query: 244 gtcttctacactgtcaaaggtaagtgtgtgtgcctactgagcccagatgctcttgctaaa 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 532 gtcttctacactgtcaaaggtaagtgtgtgtgcctactgagcccagatgctcttgctaaa 473
Query: 304 gtccttgtcagcccatccccaacattaattaatattctccttcagtgattttggctttta 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 472 gtccttgtcagcccatccccaacattaattaatattctccttcagtgattttggctttta 413
Query: 364 gaccttgataccaggcaccacactgtttctatgtgccactgggtgtgactgccatggtgg 423
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 412 gaccttgataccaggcaccacactgtttctatgtgccactgggtgtgactgtcatggtgg 353
Query: 424 gaggctacctttgtcagggtgcttggccttggcttgtctgggctccttgagtgagcagga 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 352 gaggctacctttgtcagggtgcttggccttggcttgtctgggctccttgagtgagcagga 293
Query: 484 accatggggcttctcattttgtcacctcaggactgagaatgtcttctcatctggattgtg 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 292 accatggggcttctcattttgtcacctcaggactgagaatgtcttctcatctggattgtg 233
Query: 544 acaagatctgggtggtgccaatttcactg 572
||||||||||||||||||||| |||||||
Sbjct: 232 acaagatctgggtggtgccaacttcactg 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 573
Length of database: 973
Length adjustment: 10
Effective length of query: 563
Effective length of database: 963
Effective search space: 542169
Effective search space used: 542169
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no289_p01.g1 MSMg01no289_p01.g1 CHROMAT_FILE:
MSMg01no289_p01.g1 PHD_FILE: MSMg01no289_p01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:24:21 2005
(468 letters)
>mm_chr13_57725949_57726816
Length = 868
Score = 830 bits (429), Expect = 0.0
Identities = 459/469 (97%), Gaps = 2/469 (0%)
Strand = Plus / Plus
Query: 1 acaaagtctcagctatcagctattcaaggaagtgtggtccatgtttctgatcctcaaggc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 acaaagtctcagctatcagctattcaaggaagtgtggtccatgtttctgatcctcaaggc 260
Query: 61 ttccttcaagtagggacctgctaagtgccattaccacgcctgatgaacaagacctgacag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttccttcaagtagggacctgctaagtgccattaccacgcctgatgaacaagacctgacag 320
Query: 121 atctatttgagaagactttacaaacatgctcaccatctgggtttctgaaccctgtcttgg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 atctatttgagaagactttacaaacatgctcaccatctgggtttctgaaccctgtcttgg 380
Query: 181 tgaccatcttcctcacactaggcctctgggtcagcacttctgtttctgttttgttatttc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgaccatcttcctcacactaggcctctgggtcagcacttctgtttctgttttgttatttc 440
Query: 241 atctagattatgaca-tcctggatggttggacccagatctctgaccagcgcgccatgttg 299
||||||||||||| | |||||||||||||||||||||||||||||||||| | |||||||
Sbjct: 441 atctagattatga-agtcctggatggttggacccagatctctgaccagcgtggcatgttg 499
Query: 300 gcctagttcaagacctcaaccagagagccctgagctgtagagccctatctggatagcaga 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 gcctagttcaagacctcaaccagagagccctgagctgtagagccctatctggatagcaga 559
Query: 360 ggtgaccatggcatcatcaggatgagctgatactttcaaggcatgtttctcagttggaca 419
||||||||||||||||||||||||||||||||| ||||| |||| |||||||||||||||
Sbjct: 560 ggtgaccatggcatcatcaggatgagctgatacattcaatgcatctttctcagttggaca 619
Query: 420 ctcttaacatcattaacgaaccctagcaaccatgaagatcccaagaagg 468
||||||||||||||||| ||||||||||| |||||||||||| ||||||
Sbjct: 620 ctcttaacatcattaaccaaccctagcaatcatgaagatcccgagaagg 668
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 468
Length of database: 868
Length adjustment: 10
Effective length of query: 458
Effective length of database: 858
Effective search space: 392964
Effective search space used: 392964
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
