Query= MSMg01no290_p09.b1 MSMg01no290_p09.b1 CHROMAT_FILE:
MSMg01no290_p09.b1 PHD_FILE: MSMg01no290_p09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:25:38 2005
(533 letters)
>mm_chr13_101561440_101562372
Length = 933
Score = 768 bits (397), Expect = 0.0
Identities = 421/433 (97%), Gaps = 7/433 (1%)
Strand = Plus / Minus
Query: 1 caaagaaagttataggccagccacagctacacagtgaggccctgtctccaaccgctagag 60
||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 435 caaagaaagttatagaccagccacagctacacagtgaggccctgtctccaaaagctagag 376
Query: 61 caaactattgaacagatataagccattttcaaaaatacataggtggtgagtgagcatatt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 375 caaactattgaacagatataagccattttcaaaaatacataggtggtgagtgagcatatt 316
Query: 121 ttaaaatgcttaataggtattaataccattaaagagctgcacagtaaaatgcgagctgct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 315 ttaaaatgcttaataggtattaataccattaaagagctgcacagtaaaatgcgagctgct 256
Query: 181 taaggacgagaagggctgtgaagcactgtcttctgggtagggcagagagatgcaatcgtg 240
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 255 taaggatgagaagggctgtgaagcactgtcttctgggtagggcagagagatgcaatcgtg 196
Query: 241 acctcacatagctgtagctgcttgcaagaagcctatcaaactgtcagtcattgatgaggg 300
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 195 acctcacatagctgtagctgcttgtaagaagcctatcaaactgtcagtcattgatgaggg 136
Query: 301 agggccatataagaccctagccttctttttttttttttttt-------ggttttttgaga 353
||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 135 agggccatataagaccctagccttctttttttttttttttttttttttggttttttgaga 76
Query: 354 cagggtttctctgtgtagccctgcctgtcctggaactcactttgtagaccaggctggcct 413
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 75 cagggtttctctgtgtagccctgcctgtcctggaactcactttgtagaccaggctggcct 16
Query: 414 tgaactcagaaat 426
|||||||||||||
Sbjct: 15 tgaactcagaaat 3
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 533
Length of database: 933
Length adjustment: 10
Effective length of query: 523
Effective length of database: 923
Effective search space: 482729
Effective search space used: 482729
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no290_p09.g1 MSMg01no290_p09.g1 CHROMAT_FILE:
MSMg01no290_p09.g1 PHD_FILE: MSMg01no290_p09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:25:38 2005
(285 letters)
>mm_chr13_101356494_101357178
Length = 685
Score = 543 bits (281), Expect = e-159
Identities = 284/285 (99%)
Strand = Plus / Plus
Query: 1 ttagttccatctccagccctatgtttacctggatgctgccatgtttcccaccatgatgat 60
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 201 ttagttccatctccagccctatgtttacctggatgctgccatgcttcccaccatgatgat 260
Query: 61 aatggactgaacctctgaaagtgtaagccaaccccaattcaatgttttcctttctgagtt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aatggactgaacctctgaaagtgtaagccaaccccaattcaatgttttcctttctgagtt 320
Query: 121 gtcatggtcatggcgtttcttcacagcaatgaaaccctaactaaaacagatatctaggtt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gtcatggtcatggcgtttcttcacagcaatgaaaccctaactaaaacagatatctaggtt 380
Query: 181 attaccaatttggagtctatgagtaaacttgtacatttgtttttggcaaacatctgtact 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 attaccaatttggagtctatgagtaaacttgtacatttgtttttggcaaacatctgtact 440
Query: 241 cacttaaataaaaagtaaagttttcagaaatagtggtgtagggct 285
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cacttaaataaaaagtaaagttttcagaaatagtggtgtagggct 485
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 285
Length of database: 685
Length adjustment: 9
Effective length of query: 276
Effective length of database: 676
Effective search space: 186576
Effective search space used: 186576
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
