CTCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTACAGAAAACGCGG
AATTCTTGTTCTGGATGCCATGTGCCTTTTATAAGCCTTTACCCTAACAT
TCAAGAAGAATTTATAAGTGTTGTCATTACATGCTACAAGGGATTTTTTT
TCAGATATAATTCACACCCCTAATCAGTTGCTCTGTATTCATCAAAATGA
AGGTTATCCTTGACAAATGTGATCATATCAGATGAGGCTAACTGAAAGAA
GGACTAATGGTCAGAAGTACAAGAATGCAGAATGATTTTAAGCTACAGCA
GTCCTGCTGGCCCTAACAATGCCAACTGGTATGTTACAGAGACAGTCTGT
TGTGAGCTATTAAGACAACACTATTGTCCTGATCTTTGAATTGGGCCTCT
CCCCCCAGAAGAAAAAGGGGTCAAAAGCAGGCCACCGACGCACCGCTCTG
AGAACAACCACAGATGTTCCAGCCCTAAGTCAGCGCCGGATGTCCTGACT
TCAAGATGTACCCTGATACCGCCAAGTTCCTGCTTTGTGTAACTGCCTAA
AGAATGTGCAATTCTATTGCCCCACCCCTCCGGCTGATAAGTACCTGTAC
TTCCCCTTTTGCTTGTGCAATTCTACTGCCCCATCCTTCCTGCTGGAAGG
CACTTCCCCTTTTGCTTGTGCATTTAAACATTGGGCCTGGCTAATACAGT
GGAACCTTGATGCCACTCAGAATGTTTCCAG

CGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXATTGTTTTATATAGTGGCTTGGAGGCA
CTCATCTATAGAATCATTTTTATACACTGCCTCCCAGTGTGGTATTAAGA
AGCACAGAAAAGGGGTTATTTGGACTTGAAACTAGAAGACTTAGGTTCAA
AAAGCAGAAAGGGGTTTATATAGACTTGGACATAAAAGAGACTTAGAGAC
GTAGGTTCAAATCTTAACTCTGCCACTTAGTAGCCATGGGACACTGGGTA
AGTTACTCAGCCTCACGGTGCTTCAGTTCATTATCCTTTATGGGATAACA
GGACCAACAATGCTCCACTCACATGACTTTTAAGGTAAAAGTCAGATCAC
ATATTTAAGGTATCTGGCTGACACAAATAATACTGTGTGGATATGATTTC
TTTACCAATTAAGTGCAGTTACAATTCAAATCTTTATACTTACTTATTTT
CTGTATCTGTGTTTTTAGTGACTGAATATTTTCATATGGATATGTGTATA
TGTACTAACAGGTATGTGTGAACATGCAAGTGTGTGTGTGTGTGTGTGAC
TGTANAGACTAGGACAACTTTGAGTAGTTTCCTTAATTGCTTTCCACCTT
GTTTTTAGGGACAAGGAAGGTCTCTCACATAGCTTGGGAATGCATGATTT
CAGCTGGGCTGGCAGGCTAGTGAGCTCTTG

Query= MSMg01no290_p21.g1 MSMg01no290_p21.g1 CHROMAT_FILE:
MSMg01no290_p21.g1 PHD_FILE: MSMg01no290_p21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:25:40 2005
         (657 letters)



>mm_chr13_97308854_97309910
          Length = 1057

 Score = 1183 bits (612), Expect = 0.0
 Identities = 648/669 (96%), Gaps = 15/669 (2%)
 Strand = Plus / Plus

                                                                       
Query: 1   attgttttatatagtggcttggaggcactcatctatagaatcatttttatacactgcctc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 attgttttatatagtggcttggaggcactcatctatagaatcatttttatacactgcctc 260

                                                                       
Query: 61  ccagtgtggtattaagaagcacagaaaaggggttatttggacttgaaactagaagactta 120
           ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 261 ccagtgtggtattaagaagcacagaaaagggtttatttggacttgaaactagaagactta 320

                                                                       
Query: 121 ggttcaaaaagcagaaaggggtttatatagacttggacataaaagagacttagagacgta 180
           ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 321 ggttcaaaaagcagaaaggggtttatataaacttggacataaaagagacttagagacgta 380

                                                                       
Query: 181 ggttcaaatcttaactctgccacttagtagccatgggacactgggtaagttactcagcct 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ggttcaaatcttaactctgccacttagtagccatgggacactgggtaagttactcagcct 440

                                                                       
Query: 241 cacggtgcttcagttcattatcctttatgggataacaggaccaacaatgctccactcaca 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cacggtgcttcagttcattatcctttatgggataacaggaccaacaatgctccactcaca 500

                                                                       
Query: 301 tgacttttaaggtaaaagtcagatcacatatttaaggtatctggctgacacaaataatac 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tgacttttaaggtaaaagtcagatcacatatttaaggtatctggctgacacaaataatac 560

                                                                       
Query: 361 tgtgtggatatgatttctttaccaattaagtgcagttacaattcaaatctttatacttac 420
           |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 561 tgtgtggatatgatttctttaccaattaagtgcagtcacaattcaaatctttatacttac 620

                                                                       
Query: 421 ttattttctgtatctgtgtttttagtgactgaatattttcatatggatatgtgtatatgt 480
           |||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||
Sbjct: 621 ttattttctgtatctgtgttttaa-tgactgaatattttcatatggatatgtgtatatgt 679

                                                                       
Query: 481 actaacaggtatgtgtgaacatgcaagtgtgtgtgtgtgtgtgtg--------------a 526
           ||||||||||||||||||||||||| |||||||||||||||||||              |
Sbjct: 680 actaacaggtatgtgtgaacatgcatgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtga 739

                                                                       
Query: 527 ctgtanagactaggacaactttgagtagtttccttaattgctttccaccttgtttttagg 586
           ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 ctgtagagactaggacaactttgagtagtttccttaattgctttccaccttgtttttagg 799

                                                                       
Query: 587 gacaaggaaggtctctcacatagcttgggaatgcatgatttcagctgggctggcaggcta 646
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 800 gacaaggaaggtctctcacatagcttgggaatgcatgatttcagctgggctggcaggcta 859

                    
Query: 647 gtgagctct 655
           |||||||||
Sbjct: 860 gtgagctct 868


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 38
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 657
Length of database: 1057
Length adjustment: 10
Effective length of query: 647
Effective length of database: 1047
Effective search space:   677409
Effective search space used:   677409
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)