Query= MSMg01no292_c23.b1 MSMg01no292_c23.b1 CHROMAT_FILE:
MSMg01no292_c23.b1 PHD_FILE: MSMg01no292_c23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:27:11 2005
(331 letters)
>mm_chr13_83856059_83856789
Length = 731
Score = 565 bits (292), Expect = e-165
Identities = 313/326 (96%), Gaps = 10/326 (3%)
Strand = Plus / Plus
Query: 5 gaattccgagggtttgacacatcattttgtatttcataaccctaaactgaggtatggggg 64
||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |
Sbjct: 205 gaattccgagggtttgaaacatcattttgtatttcataaccctaaactgaggtatgggag 264
Query: 65 gatccttgaaacatcccctcaggagccagcccaacctaagtcataaaagagaatttacgt 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 gatccttgaaacatcccctcaggagccagcccaacctaagtcataaaagagaat------ 318
Query: 125 gtatacataccccaaacttggtctgccacgacttgcttttggcaaccttgtggccaagac 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 ----acataccccaaacttggtctgccacgacttgcttttggcaaccttgtggccaagac 374
Query: 185 agagtcccagcacaggcgttgcaacccgaccccgctccagtcctggcacaggtgtcagcc 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 375 agagtcccagcacaggcgttgcaacccgaccccgctccagtcctggcacaggtgtcagcc 434
Query: 245 agagctggaattatgtaatggatttggtgacctgtgctcctaccaaagggaattagggag 304
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 435 agagctggaattatgtaatggatttggtgacctgggctcctaccaaagggaattagggag 494
Query: 305 ggcgaggctttattttttcttttccc 330
||||||||||||||||||||||||||
Sbjct: 495 ggcgaggctttattttttcttttccc 520
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 331
Length of database: 731
Length adjustment: 9
Effective length of query: 322
Effective length of database: 722
Effective search space: 232484
Effective search space used: 232484
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no292_c23.g1 MSMg01no292_c23.g1 CHROMAT_FILE:
MSMg01no292_c23.g1 PHD_FILE: MSMg01no292_c23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:27:11 2005
(212 letters)
>mm_chr13_84032932_84033541
Length = 610
Score = 348 bits (180), Expect = e-100
Identities = 202/210 (96%), Gaps = 4/210 (1%)
Strand = Plus / Minus
Query: 4 tcacctatcattcagaaaaacagccctcaataaaaaaaaacaggaagcacagttgaataa 63
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 380 tcacctatcattcagaaaaacagccctcaat--caaaaaacaggaagcacagttgaataa 323
Query: 64 acacacctccacagaagatggacaaacatccaataa-gttaattttcagaatttgtatac 122
|||||||||| ||||||||||||||| |||||| || |||||||||||||||||||||||
Sbjct: 322 acacacctccccagaagatggacaaatatccaa-aatgttaattttcagaatttgtatac 264
Query: 123 tgctcaatagtagatttctggttatcatgaagagggccctgggtttgatgtttgatctct 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 tgctcaatagtagatttctggttatcatgaagagggccctgggtttgatgtttgatctct 204
Query: 183 tgtgtgtgtttgtgtgtgtgtgtgtgtgtg 212
||||||||| ||||||||||||||||||||
Sbjct: 203 tgtgtgtgtgtgtgtgtgtgtgtgtgtgtg 174
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 212
Length of database: 610
Length adjustment: 9
Effective length of query: 203
Effective length of database: 601
Effective search space: 122003
Effective search space used: 122003
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
