Query= MSMg01no293_l20.b1 MSMg01no293_l20.b1 CHROMAT_FILE:
MSMg01no293_l20.b1 PHD_FILE: MSMg01no293_l20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:29:15 2005
(531 letters)
>mm_chr13_115538268_115539198
Length = 931
Score = 978 bits (506), Expect = 0.0
Identities = 521/526 (99%)
Strand = Plus / Plus
Query: 5 gaattccaaatctctacattgctcagtgttaggagtcagcattcactggtctcctccaat 64
||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattccgaatctctacattgcttagtgttaggagtcagcattcactggtctcctccaat 264
Query: 65 atacaagccagtaatttcttttctatgtttatgccagtttgggtgggttctcagtgtcct 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 atacaagccagtaatttcttttctatgtttatgccagtttgggtgggttctcagtgtcct 324
Query: 125 ccatgatcaaaacagcaacacattttgtaacttagctaactttcgggtagctttccccca 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ccatgatcaaaacagcaacacattttgtaacttagctaactttcgggtagctttccccca 384
Query: 185 ccccttttggttctctctctaattcattctgttttccttagtctatttttaatgatctca 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 ccccttttggttctctctctaattcattctgttttccttagtctatttttaatgatctca 444
Query: 245 gcatttgatttcttagttctttttccactgaagaataaatagagaagaatgactataaga 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 gcatttgatttcttagttctttttccactgaagaataaatagagaagaatgactataaga 504
Query: 305 taacacaaagactcaaaatagaacagggcaagaacttacccccatgtgctacactgagtg 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 taacacaaagactcaaaatagaacagggcaagaacttacccccatgtgctacactgagtg 564
Query: 365 gggtgtaaagggaaaaagagaggatatgaagttgggagagggatttgggggcaaatatga 424
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 565 gggtgtaaagggaaaaagagaggatatgaagttgggagagggattggggggcaaatatga 624
Query: 425 tcaaaattaaacagtagataagcaaaataaaaaattaaaagacaggacaataaagttcac 484
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 625 tcaaaattaaacagtagataagcaaaataaaaatttaaaagacaggacaataaagttcac 684
Query: 485 cctgacacttgtctgttgaattgtagcaggcagatttgtgtggatg 530
|||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 685 cctgacacttgtctgttgaattgtagcaggtagatttgtgtggatg 730
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 531
Length of database: 931
Length adjustment: 10
Effective length of query: 521
Effective length of database: 921
Effective search space: 479841
Effective search space used: 479841
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no293_l20.g1 MSMg01no293_l20.g1 CHROMAT_FILE:
MSMg01no293_l20.g1 PHD_FILE: MSMg01no293_l20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:29:15 2005
(348 letters)
>mm_chr13_115709225_115709972
Length = 748
Score = 588 bits (304), Expect = e-172
Identities = 340/358 (94%), Gaps = 10/358 (2%)
Strand = Plus / Minus
Query: 1 gagccaaatccagctagatagatattttattctccttatatttacaagttgctcctattt 60
||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 411 gagccaaatccagctggataaatattttattctccttatatttacaagttgctcctattt 352
Query: 61 ataaacttgttcacataaactattaagtggacaggaatgactttcatcacctcagctttt 120
||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||
Sbjct: 351 ataaacttgttcacataaacttttaagtggacaggaatgactttcatcacctcggctttt 292
Query: 121 aattagtgtaacatctgccgtatctattcattgctgctcttcttcctgatcagtcccatc 180
||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 291 aattagtgtaatatctgccgtatctactcattgctgctcttcttcctgatcagtcccatc 232
Query: 181 aggagattataaaatttatag----------ttatgtcaaagaagaaatgttctgtttca 230
||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 231 aggagattataaaatttatagctatgtcaaattatgtcaaagaagaaatgttctgtttca 172
Query: 231 cttactatttccatgttatatttacgtgcatttcattaccttgaggtctcattttcatag 290
|||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||
Sbjct: 171 cttactatttccatgttatatttacgtgcatttcattaacttgaggtctcgttttcatag 112
Query: 291 ttttccttattttttcctcatgaaattaaaatatttcttcagccccattttctttcat 348
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 111 ttttccttattttttcctcatgaaattaaaatatttcttcagccccattttctttcat 54
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 348
Length of database: 748
Length adjustment: 9
Effective length of query: 339
Effective length of database: 739
Effective search space: 250521
Effective search space used: 250521
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
