Query= MSMg01no293_p23.b1 MSMg01no293_p23.b1 CHROMAT_FILE:
MSMg01no293_p23.b1 PHD_FILE: MSMg01no293_p23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:29:34 2005
(704 letters)
>mm_chr13_45360733_45361837
Length = 1105
Score = 897 bits (464), Expect = 0.0
Identities = 500/512 (97%), Gaps = 1/512 (0%)
Strand = Plus / Minus
Query: 194 tggtgctgcaaggaggtgtggtgagggggagcaggaaaggaggcaaggctaaaaatctct 253
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1105 tggtgctgcaaggaggtgtggtgagggggagcaggaaaggaggcaaggctaaaaatctct 1046
Query: 254 caatgccctgcctcaatgacgtatttcctccagcaagactccacctgataaaaggctcca 313
||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1045 caaagtcctgcctcaatgacgtatttcctccagcaagactccacctgataaaaggctcca 986
Query: 314 tagattcccgaaacagcactaactcaggaccatgtcaaaaacatgatgtatagaggatat 373
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 985 tagattcccgaaacagcactaactcaggaccatgtcaaaaacatgatatatagaggatat 926
Query: 374 tttgcatccaaactaccatagatgcattgagattatatgactccatctctgtggggccat 433
|||| || ||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 925 tttgtattcaaactatcatagatgcattgagattatatgactccatctctgtggggccat 866
Query: 434 tatgtgaagtatctatgcaaacagaatgtatggctggttcaccttctaattgctttccgg 493
|||||||| |||||||||||||||||||||||||||||||| |||||||||| |||||||
Sbjct: 865 tatgtgaaatatctatgcaaacagaatgtatggctggttcaacttctaattgttttccgg 806
Query: 494 tctgtaaatgaaaaatagatcagaatattttttaatcagaagtctt-ttactgtaagtct 552
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 805 tctgtaaatgaaaaatagatcagaatattttttaatcagaagtcttcttactgtaagtct 746
Query: 553 agttgaatttttttaaaaattttgcttaaaagctagttccttacccccagtgaattattt 612
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 agttgaatttttaaaaaaattttgcttaaaagctagttccttacccccagtgaattattt 686
Query: 613 ttgtctgtgtgcaatttgcccgtctcctatcaggcttgttgatttattttcagcgtgtgt 672
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 ttgtctgtgtgcaatttgcccgtctcctatcaggcttgttgatttattttcagcgtgtgt 626
Query: 673 tacctaactgggagagagttcaagccctccct 704
||||||||||||||||||||||||||||||||
Sbjct: 625 tacctaactgggagagagttcaagccctccct 594
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 704
Length of database: 1105
Length adjustment: 10
Effective length of query: 694
Effective length of database: 1095
Effective search space: 759930
Effective search space used: 759930
X1: 9 (17.8 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 9 (18.3 bits)
S2: 9 (18.1 bits)
| Query= MSMg01no293_p23.g1 MSMg01no293_p23.g1 CHROMAT_FILE:
MSMg01no293_p23.g1 PHD_FILE: MSMg01no293_p23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:29:34 2005
(290 letters)
>mm_chr13_45200927_45201616
Length = 690
Score = 514 bits (266), Expect = e-150
Identities = 284/290 (97%)
Strand = Plus / Plus
Query: 1 ctggctccctctaggaagaagagctggtggtgtggggtgttgtcctggtccgttaggggt 60
||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 201 ctggctccctctaggaagaagagctggtggtgtggggtgttgtcctggtaggttaggggt 260
Query: 61 tgagggcagtggagtaacccaggaagcagactctggagaccagtgtcaggatcagggtgc 120
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgagggcagtggagtaaccctggaagcagactctggagaccagtgtcaggatcagggtgc 320
Query: 121 agatctggttcaatgtggaagtttactggcatatatatgtacatcgtcctatcagctaag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agatctggttcaatgtggaagtttactggcatatatatgtacatcgtcctatcagctaag 380
Query: 181 gacacatggtgctaatatccaatgagcccaaatggtgtgcaacaccaagtcatgtgaagg 240
|||| |||||||||| |||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 381 gacatatggtgctaacatccaatgagcccaaatggtatgcaacaccaagtcatgtgaagg 440
Query: 241 tgtatgcgaggagcagcatgccctagcagtgtgtctgtggacaaagggca 290
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tgtatgcgaggagcagcatgccctagcagtgtgtctgtggacaaagggca 490
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 290
Length of database: 690
Length adjustment: 9
Effective length of query: 281
Effective length of database: 681
Effective search space: 191361
Effective search space used: 191361
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
