MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	MSMg01-295L03
Chromosome	13 (Build37)
Map Location	109,542,371 - 109,542,649
singlet/doublet	singlet
Overlap gene	Pde4d
Upstream gene	Zswim6, 3021401N23Rik, 2810008M24Rik, Ndufa12l, Ercc8, LOC668123, LOC621498, Elovl7, LOC668129, LOC100040524, Depdc1b, EG668144, LOC621663
Downstream gene	LOC100040968
Link	Open Mouse BAC browser

Click to get alignment info.

name	Zswim6 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67263 MGI:1914513
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 68 ESTs, 4 Proteins

name	3021401N23Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:70680 MGI:1917930
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 10 ESTs

name	2810008M24Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:75616 MGI:1922866
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ndufa12l (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:75597 MGI:1922847
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 32 ESTs, 2 Proteins

name	Ercc8 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:71991 MGI:1919241
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC668123 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:668123
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 3 ESTs, 5 Proteins pseudo : _no_value

name	LOC621498 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:621498
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs, 8 Proteins pseudo : _no_value

name	Elovl7 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:74559 MGI:1921809
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC668129 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:668129
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 28 ESTs, 11 Proteins pseudo : _no_value

name	LOC100040524 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040524
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	Depdc1b (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:218581 MGI:2145425
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Pde4d (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:238871 MGI:99555
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG668144 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:668144 MGI:3643406
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 21 mRNAs, 2262 ESTs, 11 Proteins

name	LOC621663 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:621663
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 14 Proteins pseudo : _no_value

name	LOC100040968 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040968
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA

name	Zswim6 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94395662 GeneID:67263 MGI:1914513
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 68 ESTs, 4 Proteins product : zinc finger, SWIM domain containing 6 transcript_id : XM_358311.5

name	3021401N23Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149264670 GeneID:70680 MGI:1917930
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 10 ESTs product : RIKEN cDNA 3021401N23 gene transcript_id : XM_001474795.1

name	2810008M24Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142350660 GeneID:75616 MGI:1922866
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 2810008M24 gene transcript_id : NM_001048250.2

name	Ndufa12l (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149264689 GeneID:75597 MGI:1922847
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 32 ESTs, 2 Proteins product : Ndufa12-like transcript_id : XM_001476048.1

name	Ercc8 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141803053 GeneID:71991 MGI:1919241
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : excision repaiross-complementing rodent repair deficiency, complementation group 8 transcript_id : NM_028042.3

name	Elovl7 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142347577 GeneID:74559 MGI:1921809
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ELOVL family member 7, elongation of long chain fatty acids (yeast) transcript_id : NM_029001.3

name	LOC100040524 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149264675 GeneID:100040524
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : hypothetical protein LOC100040524 transcript_id : XM_001474859.1

name	Depdc1b (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142384408 GeneID:218581 MGI:2145425
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : DEP domain containing 1B transcript_id : NM_178683.3

name	Pde4d (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130222 GeneID:238871 MGI:99555
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : phosphodiesterase 4D, cAMP specific transcript_id : NM_011056.2

name	EG668144 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149264694 GeneID:668144 MGI:3643406
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 21 mRNAs, 2262 ESTs, 11 Proteins product : predicted gene, EG668144 transcript_id : XM_994545.2

name	LOC100040968 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149264695 GeneID:100040968
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA product : similar to CG33003-PA transcript_id : XM_001476235.1

name	Zswim6 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94395663 GeneID:67263 MGI:1914513
definition	codon_start : 1 exception : unclassified translation discrepancy note : overriding stop codons product : zinc finger, SWIM domain containing 6 protein_id : XP_358311.5 transl_except : (pos:complement(108578122..108578124),aa:OTHER) transl_except : (pos:complement(108577885..108577887),aa:OTHER) transl_except : (pos:complement(108563592..108563594),aa:OTHER) transl_except : (pos:complement(108563574..108563576),aa:OTHER) transl_except : (pos:complement(108563568..108563570),aa:OTHER) transl_except : (pos:complement(108563562..108563564),aa:OTHER) transl_except : (pos:complement(108563541..108563543),aa:OTHER) transl_except : (pos:complement(108559714..108559716),aa:OTHER) transl_except : (pos:complement(108559669..108559671),aa:OTHER) transl_except : (pos:complement(108559660..108559662),aa:OTHER) transl_except : (pos:complement(108559645..108559647),aa:OTHER) transl_except : (pos:complement(108538404..108538406),aa:OTHER) transl_except : (pos:complement(108538350..108538352),aa:OTHER) transl_except : (pos:complement(108538314..108538316),aa:OTHER) transl_except : (pos:complement(108534163..108534165),aa:OTHER) transl_except : (pos:complement(108534145..108534147),aa:OTHER) transl_except : (pos:complement(108534118..108534120),aa:OTHER) transl_except : (pos:complement(108534091..108534093),aa:OTHER) transl_except : (pos:complement(108534082..108534084),aa:OTHER) transl_except : (pos:complement(108534067..108534069),aa:OTHER) transl_except : (pos:complement(108534041..108534042),aa:OTHER) transl_except : (pos:complement(108533762),aa:OTHER) transl_except : (pos:complement(108530447..108530449),aa:OTHER) transl_except : (pos:complement(108530372..108530374),aa:OTHER) transl_except : (pos:complement(108530348..108530350),aa:OTHER) transl_except : (pos:complement(108530342..108530344),aa:OTHER) transl_except : (pos:complement(108528577..108528579),aa:OTHER) transl_except : (pos:complement(108528523..108528525),aa:OTHER) transl_except : (pos:complement(108528499..108528501),aa:OTHER) transl_except : (pos:complement(108524002..108524004),aa:OTHER) transl_except : (pos:complement(108523990..108523992),aa:OTHER) transl_except : (pos:complement(108523918..108523920),aa:OTHER) transl_except : (pos:complement(108523912..108523914),aa:OTHER) transl_except : (pos:complement(108521176..108521178),aa:OTHER) transl_except : (pos:complement(108521161..108521163),aa:OTHER) transl_except : (pos:complement(108520377..108520379),aa:OTHER) transl_except : (pos:complement(108518657..108518659),aa:OTHER) transl_except : (pos:complement(108517152..108517154),aa:OTHER) transl_except : (pos:complement(108517131..108517133),aa:OTHER) transl_except : (pos:complement(108517107..108517109),aa:OTHER) transl_except : (pos:complement(108516954..108516956),aa:OTHER) transl_except : (pos:complement(108516951..108516953),aa:OTHER) transl_except : (pos:complement(108516927..108516929),aa:OTHER) transl_except : (pos:complement(108516912..108516914),aa:OTHER) transl_except : (pos:complement(108516906..108516908),aa:OTHER) transl_except : (pos:complement(108516876..108516878),aa:OTHER) transl_except : (pos:complement(108516666..108516668),aa:OTHER)

name	3021401N23Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149264671 GeneID:70680 MGI:1917930
definition	codon_start : 1 product : hypothetical protein LOC70680 protein_id : XP_001474845.1

name	2810008M24Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:115392146 GeneID:75616 MGI:1922866
definition	codon_start : 1 product : hypothetical protein LOC75616 protein_id : NP_001041715.1

name	Ndufa12l (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149264690 GeneID:75597 MGI:1922847
definition	codon_start : 1 product : Ndufa12-like protein_id : XP_001476098.1

name	Ercc8 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:110625789 CCDS:CCDS26761.1 GeneID:71991 MGI:1919241
definition	GO_component : GO:0016363 - nuclear matrix [Evidence ISS]; GO:0000109 - nucleotide-excision repair complex [Evidence ISS]; GO:0005634 - nucleus [Evidence ISS] [Evidence IEA] GO_function : GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA]; GO:0006283 - transcription-coupled nucleotide-excision repair [Evidence ISS] codon_start : 1 note : Cockayne syndrome 1 homolog product : excision repaiross-complementing rodent repair deficiency, complementation group 8 protein_id : NP_082318.2

name	Elovl7 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31542038 GeneID:74559 MGI:1921809
definition	codon_start : 1 exception : mismatches in translation product : ELOVL family member 7, elongation of long chain fatty acids protein_id : NP_083277.2

name	LOC100040524 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149264676 GeneID:100040524
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001474909.1

name	Depdc1b (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30520073 CCDS:CCDS26762.1 GeneID:218581 MGI:2145425
definition	GO_component : GO:0005575 - cellular_component [Evidence ND]; GO:0005622 - intracellular [Evidence IEA] GO_function : GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0008150 - biological_process [Evidence ND]; GO:0007242 - intracellular signaling cascade [Evidence IEA] codon_start : 1 product : DEP domain containing 1B protein_id : NP_848798.1

name	EG668144 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94395665 GeneID:668144 MGI:3643406
definition	codon_start : 1 product : similar to ribosomal protein S3a protein_id : XP_999639.1

name	Pde4d (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:23510241 GeneID:238871 MGI:99555
definition	GO_function : GO:0004114 - 3',5'-cyclic-nucleotide phosphodiesterase activity [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA] GO_process : GO:0006198 - cAMP catabolism [Evidence IMP]; GO:0007165 - signal transduction [Evidence IEA]; GO:0006939 - smooth muscle contraction [Evidence IMP] codon_start : 1 note : dunce; cyclic AMP specific phosphodiesterase PDE4D5A product : phosphodiesterase 4D, cAMP specific protein_id : NP_035186.1

name	LOC100040968 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149264696 GeneID:100040968
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001476285.1

name	LOC621663 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:621663
definition	number : 1 pseudo : _no_value

name	LOC668123 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149264691 GeneID:668123
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 3 ESTs, 5 Proteins product : similar to ribosomal protein L31 pseudo : _no_value transcript_id : XR_032565.1

name	LOC621498 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149264672 GeneID:621498
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs, 8 Proteins product : similar to ribosomal protein L23a pseudo : _no_value transcript_id : XR_031942.1

name	LOC668129 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149264693 GeneID:668129
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 28 ESTs, 11 Proteins product : similar to NET1 homolog pseudo : _no_value transcript_id : XR_032574.1

clone name	MSMg01-367J18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-164M05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-434B07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-449J20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-540K11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-407A08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-445L12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-454I24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-308H19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-147N17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-433H13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-123L14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-305M13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-146F16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-371C19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-400C09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-067D07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-409D14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-473O12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-236M19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-376M13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-431M10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-432J01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-274J02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-159M14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-505O17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-439L24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-179O01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-413F08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-433A15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-276E03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-460J10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-132G23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-122B06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-234H06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-483A22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-382H17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-175O09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-459D20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-470K22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-343M09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-473L12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-496O18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-189J04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-391L21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-385B20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-399G05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-296G05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-342I16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-529E16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-054M20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-140O09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-157F16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-477F08
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-365E01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-055M23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-128K19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-172D22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-172E23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-422P24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-154O10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-326L18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-065M24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-385B24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-507L04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-172E22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-270N14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-233J19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-293J21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-295L03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-045D02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-302I18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-320D21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-476H06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-511I17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-270E21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-412C03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-334N03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-304C16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-497K21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-163A14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-199M17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-338D18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-323M01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-334A16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-304F15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-397L23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-525K17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-358H18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-511I01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-047I20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-503C18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-537M05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-269P12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-203F15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-358H21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-349G08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-515F22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-470O07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-327M19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-105K18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-507K23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-182J04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-321I19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-188M23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-481G07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-321E02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-391F08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-410E19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-527G09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-062C03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-218N07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-498M15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-162P01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-462H08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-103C18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-237J04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-521D12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-079B02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-076M01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-421O12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-506O01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-526J15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-372L06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-092D24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-092E24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-398D12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-371I06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-183M15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-136H23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-340A21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-020N15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-275L04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-071H14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-225P11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-126O05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-334G07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-342G24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-106B18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-126A23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-146O05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-273I05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-091J11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-083N19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-171G02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-213L03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-141P15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-166P11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-010M03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-197F09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-256A05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-085F15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-294K20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-331K09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-256M11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-060C03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-263A15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-158K01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-035A16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-118K08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-012B06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-157K23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-174J12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-221H15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-319J10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-141M09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-176J21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-089B14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-270A12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-157J18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-260H05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-135G07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-278E08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-229L18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-031G24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-040I12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-083F23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-055P16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-101C13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-010C12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-030J17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-292C11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-022K08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-183C04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-121E17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-214N14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-066J11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-064P09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-010M16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-276L23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-223K07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-158P02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-315G02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-320B23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-109H24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-086I21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-073K10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-346F04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-156K13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-179O04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-163P07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-230I08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-025G05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-170N04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-185K14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-209I22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-208I24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-306C10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-086K15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-093A12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-249L06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-269J03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-336D01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-226H24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-312K05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-196G01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-273C23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-248C07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-119F12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-271B20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-191I02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-232F14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-269O17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-190L24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-210F21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-327N03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-174D05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-119I15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-333M05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-145H13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-337L16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-307E23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-286O18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-252E17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-095F18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-107K20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-089A15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-155D05
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	MSMg01-295L03.T7 (MSMg01no295_l03.b1)	MSMg01-295L03.TJ (MSMg01no295_l03.g1)
ACC	AG423517	AG423518
length	740	758
length of high quality (start - end)	319 (46 - 364)	281 (76 - 356)
definition	CHROMAT_FILE: MSMg01no295_l03.b1 PHD_FILE: MSMg01no295_l03.b1.phd.1 CHEM: term DYE: big TIME: Tue May 17 21:31:42 2005	CHROMAT_FILE: MSMg01no295_l03.g1 PHD_FILE: MSMg01no295_l03.g1.phd.1 CHEM: term DYE: big TIME: Tue May 17 21:31:42 2005
singlet/doublet	---	singlet
BLAST hit	no hit data	unique
sequence	CAATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG AATTCCCCAAAATGAACCAAGGCAGTGAGCATCTGTGGTCAGGAAAGAGG TAGTACTGGTGTCTTAGTTATGCCCATTATTGCTGTGAGGAAATACCATG ACCAAGGCAACTTGGGGAGGAAAGGGTGTGTTTAACTTATACTTCCATAT CACTGCTTATCACTGAAGGAAGTTGGAACTTGAAAGCAAACGCAGCAAGA ACCTGGAGGTAAGAGTGGATGTAGAAGCTATGGAAGAGTGCTGCTAACTA ACTTGTTCATCAGCCCAGGTGTAGTTCCACTGATAACGGACTGGGCCCTT CCTATCAATCACTAATTTTTAAAATGTCCCACAGCATCACAACAGCTAGA TCTCATGGAGGTTTTTGCCCCCCCGAGTCCTCACTTATCTCCAGCGACTC TAGCTAATGTCAAGGTAACACAAAACTAGCCAGCATAACTGGCCCCTTGT CAACTTGACATATAATCACATCACTATTAAACCATATCATTTTCTACCTT GCTCATCCTCACGATCGTACCATATAAAACATTCTACAATCTTAAGTCCT GCTTTTGTGAGTTACAGTGCACTTCACAATTCTTGGGCTCATCTGGTTTT CTCATGTGTTCAGGGTCCACAAGTCCCGCATCCTTATAAATTTCCACTTT TGTGGCCATATCCTTTAGGTTTTTCCCCACTTTCTCCTCT	XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXTTTAAGCTACTACAACATCCTTCTG ATATTTTCTGTGGCTTCTGAAATTATTAAATAAGCAATTTTCTGGGGGGA TTATGCCTCCCTGGCTCTTGTGAAACCTATCAGTATTTTTTTTTCTTCTA ACTTACTATAGGACTGTGATAAAAGAATTACAGGATGAAATTATAGGCTT AGAGATGAGAGCCAACTGGATCCCTTCGTTCTTCCTTTAATTCCCTGCTA CAGGGAGACAATTGGATCAATTGTGCTTCTGTATACCTGACCACAGTTGT CTGAGTCATGCCCATTGTTTTTTCCCGCCACCCCAAATGGGCTTTTTTAT TCAAATAGATACGTATCACCCCCATTGTGACAGAGAAAAATAATAGTGAT CTGGTGTCAATGTTGACATAACAGCCTCTCTGACACTTGGCCACCATGAT CTGCATTTTTCGGTGTCTTTGCCCTTCCGGTATCCGTATAAGTGACTTCT TCTAAGAATCTAACAACAAATGCCCCTATTCTCTCTGGATTGAAAAGCTG AACCCCCACAAATAAATACTTCATTCTATCGTTCATTGTTTTTACCTATT GTGCCTCATATATTTTTATTTTATGGCGCCCTCCGCAAATATAAACCCAT GAAGTTTCTTCCCCCTGGGTCTTTTACGGGCCTTTGCCATCATCACTTAT ACTGTCTA
quality values	Open. Hide. 8 8 8 8 8 12 12 24 34 27 29 27 25 22 22 32 37 37 32 31 32 37 37 37 39 29 29 31 31 36 36 39 39 39 36 36 39 39 43 44 42 42 32 34 34 42 41 57 68 42 42 42 42 50 51 54 68 68 68 68 50 50 48 54 54 54 54 54 54 48 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 59 57 57 57 57 57 57 59 57 57 57 57 59 59 57 50 53 46 46 46 34 30 28 19 19 10 10 10 10 11 23 27 37 42 42 42 48 48 48 48 57 57 57 57 50 50 50 53 53 50 53 47 47 47 50 50 50 68 68 68 68 68 68 68 59 59 59 54 54 48 48 48 50 50 68 68 68 68 68 68 68 68 68 68 59 59 57 57 68 68 68 68 68 68 68 68 68 68 68 57 57 57 57 57 57 57 57 57 59 57 57 57 68 68 68 68 68 68 57 57 57 57 57 57 57 57 68 57 57 57 57 57 57 57 57 59 59 57 57 57 57 57 57 57 57 57 52 43 43 52 52 52 54 57 57 57 57 57 52 52 52 52 52 52 54 54 54 54 54 54 57 57 57 50 50 50 43 37 35 43 43 57 57 57 57 54 54 57 57 57 57 57 57 57 68 68 68 68 68 68 68 57 59 57 57 57 59 59 59 59 59 48 48 42 47 39 48 59 59 59 43 43 43 43 44 40 28 28 28 33 40 31 39 39 57 57 43 43 43 43 43 39 39 40 43 43 43 43 46 46 48 59 57 57 57 57 48 43 43 39 36 32 36 31 21 20 12 11 11 10 16 12 10 13 11 11 12 11 11 11 11 8 13 8 8 8 8 11 11 12 12 15 21 20 23 23 28 28 30 32 32 35 35 35 39 47 47 37 37 28 28 28 28 32 37 46 46 47 47 59 41 29 25 22 25 15 23 11 11 11 12 12 12 10 10 10 9 9 9 10 12 12 12 16 18 21 19 24 25 29 25 29 31 27 22 19 17 17 19 21 22 30 32 28 30 28 30 30 30 29 25 25 25 21 21 13 13 13 19 19 28 28 25 32 32 23 22 23 28 28 28 31 37 36 37 30 30 30 42 42 46 42 24 22 22 18 18 18 37 23 27 25 17 15 10 10 11 11 10 11 11 19 19 32 34 32 32 20 23 23 28 28 13 13 11 13 11 12 12 11 11 15 22 22 33 25 25 11 11 11 23 28 28 24 13 13 23 13 13 16 20 17 19 11 10 10 10 10 8 8 8 8 10 10 31 19 19 11 11 11 13 12 12 11 15 12 19 21 21 21 10 8 8 12 15 20 24 21 15 9 9 9 12 11 19 15 18 15 13 19 28 12 12 11 18 16 15 15 8 8 6 7 8 10 12 13 13 24 16 18 18 18 15 16 14 24 24 21 15 15 21 19 24 19 23 19 19 15 10 8 8 8 8 8 6 6 8 8 8 10 6 6 8 10 9 10 10 10 10 8 8 8 9 9 10 11 11 10 9 12 8 8 8 10 10 13 8 8 8 8 8 10 11 8 8 8 8 8 8 10 13 16 19 10 13 8 8 8 8 8 10 8 8 8 9 8 8 8 8 8 8 8 8 7 9 8 10 19 15 15 14 14 10 10 11 17 28 35 14 15 8 8 8 8	Open. Hide. 6 6 7 10 8 6 6 8 10 13 20 28 28 32 26 29 44 39 39 47 47 50 50 48 48 48 48 57 48 39 37 17 15 10 10 10 13 17 17 22 22 33 26 43 54 54 54 57 42 48 42 42 42 42 48 54 54 54 54 44 37 30 37 30 41 41 36 36 36 28 40 42 50 50 51 68 57 57 47 43 43 47 59 59 68 57 57 47 47 47 47 47 47 50 57 57 57 57 57 57 57 57 68 68 68 68 68 68 68 57 57 57 57 57 52 59 38 38 27 17 17 24 27 32 37 35 35 35 43 43 57 57 54 52 52 57 57 57 57 57 57 57 57 57 57 57 59 57 57 57 57 57 57 57 57 57 68 68 68 59 59 59 57 57 59 59 59 59 59 57 52 52 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 68 68 62 59 57 57 57 59 59 59 59 57 57 57 59 59 59 59 59 59 59 57 57 57 57 57 57 57 57 57 57 57 57 57 57 59 57 57 57 57 57 57 39 39 37 57 57 57 57 57 57 57 52 52 52 52 52 52 52 52 44 50 52 43 43 43 43 43 43 28 29 29 43 44 37 35 35 43 43 35 35 35 43 44 57 54 57 57 57 57 48 48 57 57 57 57 57 57 44 37 32 32 42 42 57 59 57 57 48 46 43 43 37 32 37 32 32 20 20 20 44 37 48 47 46 43 43 43 43 46 46 48 48 32 32 23 23 22 24 43 43 39 43 43 43 43 39 36 43 39 43 43 43 39 39 28 28 20 20 19 24 24 28 33 32 21 20 20 24 28 30 12 12 11 11 11 10 9 9 9 9 9 10 10 15 15 15 9 9 9 9 9 9 16 22 11 11 11 12 22 21 20 20 24 32 34 47 43 43 43 43 39 37 39 39 30 30 32 31 23 23 28 28 28 19 24 12 12 10 11 10 19 13 14 14 9 12 11 11 8 8 8 8 8 8 11 11 12 19 15 17 12 11 8 8 8 8 8 8 10 16 19 22 12 9 8 11 8 8 8 8 9 14 20 34 37 43 37 37 30 20 22 11 11 11 17 17 17 24 24 32 33 42 34 28 28 28 28 32 25 17 13 10 10 13 17 24 30 28 33 25 28 21 21 15 14 14 10 18 10 10 10 12 13 19 15 18 12 12 13 28 20 10 8 8 8 8 8 10 12 12 8 11 11 8 8 8 14 21 18 11 10 10 10 10 8 8 8 8 8 8 15 21 8 8 8 8 8 10 19 18 11 10 10 8 8 8 8 8 8 11 11 10 9 9 12 12 14 16 13 15 10 10 8 6 6 10 8 8 7 8 8 13 17 14 14 11 18 11 13 12 15 9 8 8 8 8 10 10 10 16 10 12 6 6 8 8 8 10 10 8 8 6 6 10 10 10 14 12 15 8 8 8 8 10 9 8 6 6 6 8 8 10 10 10 8 8 9 9 9 9 13 15 10 10 11 8 8 8 15 15 12 12 10 19 10 10 10 11 11 11 10 10 10 10 10 8 8 9 8 8 8 8 10 10 7 8 8 8 12 11 8 8 8 8 8 8 12 8 8 8 8 8 8 11 13 15 15 9 9 9 8 10 10 10 10 10 11 12 15 11 12 10 10 9 11 9 11 11 8 8 8 8 8 8 12 9 8 9 9 8 6 6 6 8 8 8 8 8 8 13 10 10 10 6 6 6 7 8 8

Alignment Information

BAC End 1

BAC End 2

Query= MSMg01no295_l03.g1 MSMg01no295_l03.g1 CHROMAT_FILE:
MSMg01no295_l03.g1 PHD_FILE: MSMg01no295_l03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:31:42 2005
         (281 letters)



>mm_chr13_109542171_109542849
          Length = 679

 Score =  507 bits (262), Expect = e-148
 Identities = 276/282 (97%), Gaps = 4/282 (1%)
 Strand = Plus / Plus

                                                                       
Query: 1   tttaagctactacaacatccttctgatattttctgtggcttctgaaattattaaataagc 60
           |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tttaagctactacaacattcttctgatattttctgtggcttctgaaattattaaataagc 260

                                                                       
Query: 61  aattttct-ggggggattatgcctccctggctcttgtgaaacctatcagtattttttttt 119
           |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||  
Sbjct: 261 aattttctgggggggattatgcctccctggctcttgtgaaacctatcagtattttttt-- 318

                                                                       
Query: 120 cttctaacttactataggactgtgataaaagaattacaggatgaaattataggcttagag 179
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 -ttctaacttactataggactgtgataaaagaattacaggatgaaattataggcttagag 377

                                                                       
Query: 180 atgagagccaactggatcccttcgttcttcctttaattccctgctacagggagacaattg 239
           ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 atgagagccaactggataccttcgttcttcctttaattccctgctacagggagacaattg 437

                                                     
Query: 240 gatcaattgtgcttctgtatacctgaccacagttgtctgagt 281
           ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 gatcaattgtgcttctgtatacctgaccacagttgtctgagt 479


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 281
Length of database: 679
Length adjustment: 9
Effective length of query: 272
Effective length of database: 670
Effective search space:   182240
Effective search space used:   182240
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information