TCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTCCAGAGGAGCCGCGG
AATTCCTCAGGGTCTCGGTTGTCATTCTCTGTGATGCTTGCCTGGCATAC
AGGAAGTCCTCTGGGGTTCTTCTACTGTGTAGAAACTGGATGTGAAGTAC
TATATGCCTGTACTCTCCGCCCTCAGAAGATGGACGCTGGCCAGAGGATC
AGAAGTTTGAGGTTAACCTTGGCTAAACAGTAGGTCTGAGGTCAGCCTAG
GATACACGAGACCCTGTCTCAAAGTATATACATACATACATACATACATA
CATACACACACACACACACATACACACACACACACACACACCCAATGATC
ACATGTCTTCAGACCTCCTTCTCACTATGAGTAGTTAGACTGCAGCGCTG
CAAAGCACCATATCAGCAACAACTACAGGACAGCCTGTAGCAGCATGAAC
ACAGGCAAGGCTGCGCTCCTTCACTCTTTGCTGAGATTTCCTGAGAGGCC
CTGAGGACGAGAGGATACTGTGACCCTTCACTTTGCCCCGATTCTAACGA
TGACCCACTGCCCATATAAATGTGTGCATGCTTGGGGCTGACGGCAAAGG
CGAAAGGCCACATACCATCTTCAGTCTCTTTCAAGATGCCCATCTGAGAG
ACCACCAGTAGACCTGAAGGATTGGCTGAGCCTGCTGTCCTGCTGGTCTC
CCCTCAACCGCTCTCATGAGCCTGGCACGGGTTCTGTTGGCCTTT

CGATGACXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXATGACTATGAAGATAGCTCTACAG
TGGATACTTAAAGGAGTACTTTAAACTGAAGAGAAAGATAAACACTACCA
AGAGGCCACAGGAGAAAAATAAGCAGTGTCAGGCTAGTTAATCAAACAAG
GAAAAAGAAAACAGCCCAAATAAACGAATGACAGAAATGAATACATACTT
TCCTAAGCTAACTCTGAATATTAATGGCCTCAGTTTCCTCAATCAAAAGA
CATAGATGAACTTTCCATCATCTTTCTGCACCATCACGATGGTACACATG
AGAGTTCTTCTCAACAGTCTCAAGAGTATTCACAGTTCTGAGGAGAGAAT
TCATCTTCAGGGCCTCATCTGAAGATGCTACAAAGTCATCATGCAGTTCC
CAACTGTAATGATGACACATGGTTACATTGGTGAATTTGAAATCATGGAT
GATTATTGAACTGGGGAAGTTACTGTGAACTTCAAAGGCAGGATGAACAA
GTGTGGAGTGGTCAGCCCTAATATTTGATATGCAGAATAATCTGCTCCCA
TCCTATCAGTTATTTTCATTGTACTGGTGATCTTAGCTGGCATCGTGGGC
CATTAAGAAGCAAGATAAAAACACACAGGCAGGAAAAATCCTCAGGTTTC
TTTTCTAGAGATGTAAGACATGTATTAATAAAAGGCCTTATTGCGGGAAA
AAACA

Query= MSMg01no297_i04.g1 MSMg01no297_i04.g1 CHROMAT_FILE:
MSMg01no297_i04.g1 PHD_FILE: MSMg01no297_i04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:33:58 2005
         (548 letters)



>mm_chr13_95523871_95524817
          Length = 947

 Score =  774 bits (400), Expect = 0.0
 Identities = 516/572 (90%), Gaps = 29/572 (5%)
 Strand = Plus / Minus

                                                                       
Query: 1   atgactatgaagatagctctacagtggatacttaaaggagtactttaaactgaagagaaa 60
           ||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||| 
Sbjct: 936 atgactatgaagatagctctacagtggatacttaaagtagtactttaaattgaagagaa- 878

                                                                       
Query: 61  gataaacactaccaagaggccacaggagaaaaataagcagtgtcaggctagttaatcaaa 120
              ||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 877 ---aaacactgccaagaggccacaggagaaaaataagcagtgtcaggctacttaatcaaa 821

                                                                       
Query: 121 caaggaaaaagaaaacagcccaaataaacgaatgacagaaatgaatacatactttcctaa 180
           |||||||||||||| |||||||||| ||| ||||||||||||||||||||||||| ||  
Sbjct: 820 caaggaaaaagaaagcagcccaaatcaaccaatgacagaaatgaatacatacttttctgt 761

                                                                       
Query: 181 gctaactctgaatattaatggcctcagtttcctcaatcaaaagacatagatgaactttcc 240
           | ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 760 gataactctgaatattaatggcctcagtttcctcaatcaaaagacataggtgaactttcc 701

                                                                       
Query: 241 atcatctttctgcaccatcacgatggtacacatgagagttcttctcaacagtctcaagag 300
           ||||||||||||||||||||| ||||||||||||| ||||||||||||  ||||||||||
Sbjct: 700 atcatctttctgcaccatcaccatggtacacatgacagttcttctcaatggtctcaagag 641

                                                                       
Query: 301 tattcacagttctgaggagagaattcatcttcagggcctcatctgaagatgctacaaagt 360
           ||||||||||| ||||||||||| ||||||||| ||||||||||||||||||||||||||
Sbjct: 640 tattcacagttttgaggagagaactcatcttcaaggcctcatctgaagatgctacaaagt 581

                                                                       
Query: 361 catcatgcagttcccaactgtaatgatgacacatggttacattggtgaatttgaaatcat 420
           ||| ||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 580 cattatgcagttctcaactgtaatgatgacacatggttacactggtgaatttgaaatcat 521

                                                                       
Query: 421 ggatgattattgaactggggaagttactgtgaacttcaaaggcaggatgaacaagtgtgg 480
           ||||||||||| | |||||||||| ||||||||| ||| |||||||||||||||||||||
Sbjct: 520 ggatgattattcagctggggaagtcactgtgaacctcacaggcaggatgaacaagtgtgg 461

                                                                       
Query: 481 agtggtcagccctaatatttgatat------------------------gcagaataatc 516
           ||||||||||||| |||||||||||                        |||||||||||
Sbjct: 460 agtggtcagccct-atatttgatatacaactcagacacccagaacagcagcagaataatc 402

                                           
Query: 517 tgctcccatcctatcagttattttcattgtac 548
           ||||||||||||||||||||||||||||||||
Sbjct: 401 tgctcccatcctatcagttattttcattgtac 370


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 548
Length of database: 947
Length adjustment: 10
Effective length of query: 538
Effective length of database: 937
Effective search space:   504106
Effective search space used:   504106
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)