TATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCTTCTTCGTACACTTTTTCTTTTGATGAATATGAAATATCCTTCCTT
GTTTATTTATTTTTTTATAACTTTCGGTTGGATGTCGATTTCATTTGATA
TTAGAATGGCTACTCCAGCTTGTTTCTTGGGACCACTTGTTTGAAGAATT
GTTTTCCACCCTTTTACTCTGAGGTAGTGTCTGTGTTTGTCACTGTGGTG
GGTTTCCTGTATGCAGGAAAATGTTGGGTCTTATCTACATATCCAGTTTG
TTACACCATGTCTTTTTTTGGGGGGGGTAATTGATTCCTTTGATATTAAA
AGAAATTAAGAAAATGTAATTATAGCTTCCTGTTATTTTTGTTGCTAGAG
ATGGAATTATATTTTCTGTGGTTATCTTCTTTTTGGTTTGTTAAAAGAAG
ATTATTTCCTTGATTTTTCTAGAATGTAGCTTCCCTCCTTGTGTTGGAGT
TTTCCATTTATTTTCCTTTTAAGGGCTGAGTTTGTGGAAAGATACTGTGA
AATTTGTTTTTGTCATAGAATATCTTGGTTTCTCCATGTATAGTTATTAA
GAGTTTTGGTGGGTATAGTAGCTTATGCTGGCATTTGTGCTCCCTTATGG
TCTTTATGACATCTGCCCAGGATCTTCTGGCCTTCATAGTTTCTGGTGAG
AAGTCAGGTGCAATTCTAATACGTCTGCCATTATTTGTTAC

TGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXATTGAAGCATTCCAATATATCCAGATCC
AGAAACAATTGAAGAAAGAAAAACAAAGAGAGAAAGGCAGAGACAGAGAG
ACACAGAGTGAGATTGGTCCCCACTTGAGCTTTTAAAATGCTAACACCAA
ACCCCAAAGTGACATATTTTCAATAACAATGCCAGTAAGGCTGTAATTCC
TAATCCTTCTCAAGTAGTCCTAATCCCTAATAACCAGGAATTCAATTATA
TGAGCCTTAGGGGGCCATGCTTTTTCAAACCACCACATTCTACATTATTC
ATTATCTCCTCTCTCTTTCCAATTAATTAAACCTTTATTCTTGCTGTGTA
AAAATGGTTCAGGTTTACCTTATGTTGGAAAATTTCAATTTCTTTGAAGT
TTCTTTTACATAAAGCATCATTTCATTTCTATATCTTGTCAGAATCTTTC
TCTTCCAGCCTGGCTTCCTTGATCTTGATCTTTGTCAGTGTTAAATTTCT
GCTGACAGTGTTTGGCAACATTGTTGTTGTGGCCTTCAATACTTTATTAG
GTGTGGAATTTTCTACTTACTTGAAATTTTATGCAGATGTTCCAAAAATG
AAACAAATAATGTGGGCCCCCCTTGATTGAAGGTAGTTTCTCTCCCACTT
CAGGTTTCAACTTTTCTACTTATATCACTGTACTATTGTTCTN

Query= MSMg01no300_d09.g1 MSMg01no300_d09.g1 CHROMAT_FILE:
MSMg01no300_d09.g1 PHD_FILE: MSMg01no300_d09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:37:19 2005
         (671 letters)



>mm_chr13_86693447_86694517
          Length = 1071

 Score = 1133 bits (586), Expect = 0.0
 Identities = 601/606 (99%)
 Strand = Plus / Minus

                                                                        
Query: 65   gcagagacagagagacacagagtgagattggtccccacttgagcttttaaaatgctaaca 124
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1071 gcagagacagagagacacagagtgagattggtccccacttgagcttttaaaatgctaaca 1012

                                                                        
Query: 125  ccaaaccccaaagtgacatattttcaataacaatgccagtaaggctgtaattcctaatcc 184
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1011 ccaaaccccaaagtgacatattttcaataacaatgccagtaaggctgtaattcctaatcc 952

                                                                        
Query: 185  ttctcaagtagtcctaatccctaataaccaggaattcaattatatgagccttagggggcc 244
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 951  ttctcaagtagtcctaatccctaataaccaggaattcaattatatgagccttagggggcc 892

                                                                        
Query: 245  atgctttttcaaaccaccacattctacattattcattatctcctctctctttccaattaa 304
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 891  atgctttttcaaaccaccacattctacattattcattatctcctctctctttccaattaa 832

                                                                        
Query: 305  ttaaacctttattcttgctgtgtaaaaatggttcaggtttaccttatgttggaaaatttc 364
            |||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||
Sbjct: 831  ttaaacctttattcttgctgtgtaaaaatggttcagctttactttatgttggaaaatttc 772

                                                                        
Query: 365  aatttctttgaagtttcttttacataaagcatcatttcatttctatatcttgtcagaatc 424
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 771  aatttctttgaagtttcttttacataaagcatcatttcatttctatatcttgtcagaatc 712

                                                                        
Query: 425  tttctcttccagcctggcttccttgatcttgatctttgtcagtgttaaatttctgctgac 484
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 711  tttctcttccagcctggcttccttgatcttgatctttgtcagtgttaaatttctgcttac 652

                                                                        
Query: 485  agtgtttggcaacattgttgttgtggccttcaatactttattaggtgtggaattttctac 544
            |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 651  agtgtttgtcaacattgttgttgtggccttcaatactttattaggtgtggaattttctac 592

                                                                        
Query: 545  ttacttgaaattttatgcagatgttccaaaaatgaaacaaataatgtgggccccccttga 604
            ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 591  ttacttgaaattttatgcagatgttccaacaatgaaacaaataatgtgggccccccttga 532

                                                                        
Query: 605  ttgaaggtagtttctctcccacttcaggtttcaacttttctacttatatcactgtactat 664
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 531  ttgaaggtagtttctctcccacttcaggtttcaacttttctacttatatcactgtactat 472

                  
Query: 665  tgttct 670
            ||||||
Sbjct: 471  tgttct 466


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 671
Length of database: 1071
Length adjustment: 10
Effective length of query: 661
Effective length of database: 1061
Effective search space:   701321
Effective search space used:   701321
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)