Query= MSMg01no302_g16.b1 MSMg01no302_g16.b1 CHROMAT_FILE:
MSMg01no302_g16.b1 PHD_FILE: MSMg01no302_g16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:40:03 2005
(315 letters)
>mm_chr13_112509583_112510297
Length = 715
Score = 572 bits (296), Expect = e-168
Identities = 308/312 (98%)
Strand = Plus / Plus
Query: 4 ggaattctaaggatgtgtcaagacattacttttaaaaagtacccttggtcagagttggtg 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattctaaggatgtgtcaagacattacttttaaaaagtacccttggtcagagttggtg 263
Query: 64 gcacacacctttaaccccagcacctggaaggcagaggccgaaggatctcttgagactcag 123
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 gcacacacctttaagcccagcacctggaaggcagaggccgaaggatctcttgagactcag 323
Query: 124 tttgagaccagacgtagttccaggagagccaggacaccctcaccacagaaacaggagagg 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 tttgagaccagacgtagttccaggagagccaggacaccctcaccacagaaacaggagagg 383
Query: 184 aacaggtgttcctgccgccaactttgtccttcaggatccccacactaaaataacctcttt 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 aacaggtgttcctgccgccaactttgtccttcaggatccccacactaaaataacctcttt 443
Query: 244 cactcatctttaccctcccccatttcccatgttcaagtgggtagggggaagaggataacc 303
||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||
Sbjct: 444 cactcatctttaccctcccccgtttcccatgttcaagtgggtagggtgaagaggataacc 503
Query: 304 tctatccagttg 315
||||||| ||||
Sbjct: 504 tctatccggttg 515
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 315
Length of database: 715
Length adjustment: 9
Effective length of query: 306
Effective length of database: 706
Effective search space: 216036
Effective search space used: 216036
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no302_g16.g1 MSMg01no302_g16.g1 CHROMAT_FILE:
MSMg01no302_g16.g1 PHD_FILE: MSMg01no302_g16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:40:03 2005
(128 letters)
>mm_chr13_112675901_112676429
Length = 529
Score = 219 bits (113), Expect = 7e-62
Identities = 122/125 (97%), Gaps = 2/125 (1%)
Strand = Plus / Minus
Query: 1 tcatccttccaacatggcctagttgttcttaagcgcattgtgatctctacctaaggtcaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tcatccttccaacatggcctagttgttcttaagcgcattgtgatctctacctaaggtcaa 266
Query: 61 atgggttggcagtttgggcaagcatggaagtacaaatggaaag-gggggtgggacggggt 119
||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||
Sbjct: 265 atgggttggcagtttgggcaagcatggaagtacaaatgggaagtgggggtgggacgggg- 207
Query: 120 ggggg 124
|||||
Sbjct: 206 ggggg 202
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 6
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 128
Length of database: 529
Length adjustment: 8
Effective length of query: 120
Effective length of database: 521
Effective search space: 62520
Effective search space used: 62520
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
