Query= MSMg01no307_c04.b1 MSMg01no307_c04.b1 CHROMAT_FILE:
MSMg01no307_c04.b1 PHD_FILE: MSMg01no307_c04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:48:06 2005
(368 letters)
>mm_chr13_98548900_98549667
Length = 768
Score = 663 bits (343), Expect = 0.0
Identities = 358/363 (98%)
Strand = Plus / Plus
Query: 6 gaattcattgcattgcctcagaggctgggtagggttgctcttaaggaagatgagtttgac 65
|||||||||||| || |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 206 gaattcattgcagtgtatcagaggctgggtagggttgctcttaaggaagatgagtttgac 265
Query: 66 caatggaactgaactacggttagctttattctcatatccaagcatttgggaacacttacc 125
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 caatggaactgaactacggttagctttattctcatatccaagcatttgggaacacttacc 325
Query: 126 aaaggggatctgcatggtggcagtcaaacatttgatacaaataggtggtttcctttcata 185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 aaaggggatctgcatggtggcagtcaaacatttgatacaaataggtggtttcctttcata 385
Query: 186 gccttatgtatcagttaatttcttacttgctgtggtaaaacaaatgcctgacaaagcaat 245
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 gccttatgtatcagttaatttcttacttgctgtggtaaaacaaatgcctgacaaagcaat 445
Query: 246 ttagggacggaatggtttatttgggttcacaatttgaagatgcaggtcactgggtcagga 305
||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 446 ttagggatggaatggtttatttgggttcacaatttgaagatccaggtcactgggtcagga 505
Query: 306 aagttgtggagactttgaagagcatgaggcagtttgtcactgtgtgtctgcagtctagaa 365
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 506 aagttgtggagactttgaagagcatgaggcagtttgtcactgtgtgtctgcagtctagaa 565
Query: 366 gca 368
|||
Sbjct: 566 gca 568
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 368
Length of database: 768
Length adjustment: 9
Effective length of query: 359
Effective length of database: 759
Effective search space: 272481
Effective search space used: 272481
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no307_c04.g1 MSMg01no307_c04.g1 CHROMAT_FILE:
MSMg01no307_c04.g1 PHD_FILE: MSMg01no307_c04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:48:06 2005
(356 letters)
>mm_chr13_98614312_98615063
Length = 752
Score = 630 bits (326), Expect = 0.0
Identities = 347/356 (97%), Gaps = 4/356 (1%)
Strand = Plus / Minus
Query: 1 atcgtaggagcaatagacgaaggttacttcctgttttgccatgatccggagagagtgaag 60
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 552 atcgtaggagcaatagacgaaggttacttccagttttgccatgatccggagagagtgaag 493
Query: 61 atgacttagatccactcagggtgtctatgtctcactgcatattagaagcatctaggctgg 120
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 492 atgacttagatccactcagggtgtctatgtctcactgcgtattagaagcatctaggctgg 433
Query: 121 caccaaaatacagaggagacctttctgggcagggtgtttgttggtgctggtctattgtat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 432 caccaaaatacagaggagacctttctgggcagggtgtttgttggtgctggtctattgtat 373
Query: 181 ctgctggcacgtggcagatacactgaacactggtaaccagacatgggcttagcactctag 240
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 372 ctgctggcacgtggcagatacactgaacactggtaaccagacatgggctcagcactctag 313
Query: 241 ggaccagagtggactgtggagagaaagctgtttggggttcagattgtgtttcaagagtga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 ggaccagagtggactgtggagagaaagctgtttggggttcagattgtgtttcaagagtga 253
Query: 301 gatttctaaacacaaacaacaaaaaaaagagaacagtttaacattctgtcctactt 356
|||||||||| |||||||| |||| ||||||||||||||||||||||||||||
Sbjct: 252 gatttctaaaaacaaacaa----aaaatgagaacagtttaacattctgtcctactt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 356
Length of database: 752
Length adjustment: 9
Effective length of query: 347
Effective length of database: 743
Effective search space: 257821
Effective search space used: 257821
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
