Query= MSMg01no307_k10.b1 MSMg01no307_k10.b1 CHROMAT_FILE:
MSMg01no307_k10.b1 PHD_FILE: MSMg01no307_k10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:48:46 2005
(658 letters)
>mm_chr13_93777612_93778669
Length = 1058
Score = 1234 bits (638), Expect = 0.0
Identities = 653/658 (99%)
Strand = Plus / Minus
Query: 1 acaagagactggtgtggagctagagtggtctatacacaccctcttacctctacttggtaa 60
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 858 acaagagactggtgtggagctagagtggtctatacacaccctcttacctttacttggtaa 799
Query: 61 ggaaaggttcaaagatggcaacttttttcccgagtagtctggtgcttcagagtgctgagc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 798 ggaaaggttcaaagatggcaacttttttcccgagtagtctggtgcttcagagtgctgagc 739
Query: 121 tcaatagtaatagagtagatacctctggagaaagataacctaccctggacttcctccaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 738 tcaatagtaatagagtagatacctctggagaaagataacctaccctggacttcctccaaa 679
Query: 181 gggactcaagaattttagagttaaattgtctcaagatggcatctcgcttaccccagtaag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 678 gggactcaagaattttagagttaaattgtctcaagatggcatctcgcttaccccagtaag 619
Query: 241 gctctgagtgttagttcagtgtcctctgaatccttgtttccctgggagcctggtactctc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 618 gctctgagtgttagttcagtgtcctctgaatccttgtttccctgggagcctggtactctc 559
Query: 301 cccaggcagagcaagcgcattagggaagaggagatgcaacaaaaccctcaggccccaaag 360
|||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||
Sbjct: 558 cccaggcagagcaagcgcattagggaagaggagatgcaacaacagtctcaggccccaaag 499
Query: 361 atgctctgtgtttaggtgaaacaagaaagaaggcctggggctggttcttgaattctcctc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 498 atgctctgtgtttaggtgaaacaagaaagaaggcctggggctggttcttgaattctcctc 439
Query: 421 gccacactaagacaggggaacagaatggcaatctgtcccaggctctcttaagctagaaga 480
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 gccacagtaagacaggggaacagaatggcaatctgtcccaggctctcttaagctagaaga 379
Query: 481 gaagagaacctttgccagacaacacttacctgaggtggcttctcggttatgagatcaaag 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 gaagagaacctttgccagacaacacttacctgaggtggcttctcggttatgagatcaaag 319
Query: 541 gtgccctaggaggcagctggagagaaagtgacctccattctgactggggttgaatcttcc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 gtgccctaggaggcagctggagagaaagtgacctccattctgactggggttgaatcttcc 259
Query: 601 tatattaatgcttccagagctccactttccactcccatgggatagacaaagagactta 658
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 258 tatattaatgcttccagagctccactttccactcccatgggatagacaaagagactta 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 658
Length of database: 1058
Length adjustment: 10
Effective length of query: 648
Effective length of database: 1048
Effective search space: 679104
Effective search space used: 679104
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no307_k10.g1 MSMg01no307_k10.g1 CHROMAT_FILE:
MSMg01no307_k10.g1 PHD_FILE: MSMg01no307_k10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:48:46 2005
(651 letters)
>mm_chr13_93595526_93596568
Length = 1043
Score = 1208 bits (625), Expect = 0.0
Identities = 641/651 (98%), Gaps = 8/651 (1%)
Strand = Plus / Plus
Query: 1 ttgtgcaactttctcatttgtgcacccgagacacttggggtgggggttgcctggctcaca 60
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 201 ttgtgcaactttctcatttgtgcacccgagacacttgaggtgggggttgcctggctcaca 260
Query: 61 gctggtgctcagtaatatcgagaaagtgctgtgcctgtttgtctccaggaaagttcttcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gctggtgctcagtaatatcgagaaagtgctgtgcctgtttgtctccaggaaagttcttcc 320
Query: 121 aatagaggtgagcctcattcccatctacacacttttagctccgaaggatggagccggagc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aatagaggtgagcctcattcccatctacacacttttagctccgaaggatggagccggagc 380
Query: 181 aacagtgaactctcggcagatgaggtccaaagacagcacaggggaactgactgacctagg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aacagtgaactctcggcagatgaggtccaaagacagcacaggggaactgactgacctagg 440
Query: 241 gaaacgaagcctcctatatggctctaagaagttttctcaattctttgtttgtttctatgg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gaaacgaagcctcctatatggctctaagaagttttctcaattctttgtttgtttctatgg 500
Query: 301 aatctattacttttcaacaacataacaacaacaacaacaaaaaccctaaaaatcatgctt 360
|||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 501 aatctattacttttcaacaaca--------acaacaacaaaaaccctaaaaatcatgctt 552
Query: 361 cactttaaaaacagcactatgaacaaaactgtacctgtgtgcagtgcaccaacacgcagg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 553 cactttaaaaacagcactatgaacaaaactgtacctgtgtgcagtgcaccaacacgcagg 612
Query: 421 caagttttctaggtgtcatttttctgaggatatacaaggccacacacacacagctaccag 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 613 caagttttctaggtgtcatttttctgaggatatacaaggccacacacacacagctaccag 672
Query: 481 tgtttctcttttgtcctagttagggttttattgctgtgaagagacaccatgaacatggtg 540
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 673 tgtttctcttttgtcctagttagggttttattgctgtgaagagacaccataaacatggtg 732
Query: 541 actcctataaaggaaaatatttacttaattggggctggtttatatttttggagatttagt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 733 actcctataaaggaaaatatttacttaattggggctggtttatatttttggagatttagt 792
Query: 601 tcattattatcatgacagaaagcatggcagtgtgcagacagaaaggtggtt 651
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 793 tcattattatcatgacagaaagcatggcagtgtgcagacagaaaggtggtt 843
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 651
Length of database: 1043
Length adjustment: 10
Effective length of query: 641
Effective length of database: 1033
Effective search space: 662153
Effective search space used: 662153
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
