Query= MSMg01no307_m05.b1 MSMg01no307_m05.b1 CHROMAT_FILE:
MSMg01no307_m05.b1 PHD_FILE: MSMg01no307_m05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:48:54 2005
(657 letters)
>mm_chr13_95572551_95573607
Length = 1057
Score = 1212 bits (627), Expect = 0.0
Identities = 648/655 (98%), Gaps = 2/655 (0%)
Strand = Plus / Plus
Query: 4 ggaattctgagtttttcctcattataatagaaacacagtcagagaaggtatacatgtaat 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattctgagtttttcctcattataatagaaacacagtcagagaaggtatacatgtaat 263
Query: 64 cctgtgaatggtgtttcgttagtttcctcccctcaaccttttgcttgtttcctttttgtt 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 cctgtgaatggtgtttcgttagtttcctcccctcaaccttttgcttgtttcctttttgtt 323
Query: 124 tgtgtgaggccgtctaactcagcccagcagagtcttgaactcctgagtgctgggcttaag 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 tgtgtgaggccgtctaactcagcccagcagagtcttgaactcctgagtgctgggcttaag 383
Query: 184 ctgaaccttgagttggagaacacgtgg-gccacattgtatgatgacttgtatcaagttta 242
|||||||||||||||||||||||| || |||||||||||||||||||| |||||||||||
Sbjct: 384 ctgaaccttgagttggagaacacg-ggagccacattgtatgatgacttatatcaagttta 442
Query: 243 tcttctcctgtcttgttctcatgtgactgtcagtagttaatatgtctctttcggctcttg 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 tcttctcctgtcttgttctcatgtgactgtcagtagttaatatgtctctttcggctcttg 502
Query: 303 ctcttgatagcttctgcatgcatatatttgttattgctattattttaagtaaactagact 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 ctcttgatagcttctgcatgcatatatttgttattgctattattttaagtaaactagact 562
Query: 363 tcttgttcacccctaggtagtgatatcaagtttatgatcatcagaagtttgattattgct 422
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 tcttgttcatttctaggtagtgatatcaagtttatgatcatcagaagtttgattattgct 622
Query: 423 tacttggctagactctctgagctaccatacttttgtatattagtttctattagcacgttg 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 623 tacttggctagactctctgagctaccatacttttgtatattagtttctattagcatgttg 682
Query: 483 gttctatgaagtcatgtacatactccctgagacttaacacatacaacataataacaaagt 542
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 683 gttctatgaagtcatgtacatactccctgagacttaacacatacaacataataacaaagt 742
Query: 543 cataaaaacaaattaagcattcaagtatgctgaagaatgtaaactactttacttgtgaat 602
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 743 cataaaaacaaattaagcattcaagtatgctgaagaatgtaaactactttacttgtgaat 802
Query: 603 ataatcctaagaagagagaacactttgaagtacgatgtaaaatgcagaaatctaa 657
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 803 ataatcctaagaagagagaacactttgaagtacgatgtaaaatgcagaaatctaa 857
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 657
Length of database: 1057
Length adjustment: 10
Effective length of query: 647
Effective length of database: 1047
Effective search space: 677409
Effective search space used: 677409
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no307_m05.g1 MSMg01no307_m05.g1 CHROMAT_FILE:
MSMg01no307_m05.g1 PHD_FILE: MSMg01no307_m05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:48:54 2005
(245 letters)
>mm_chr13_95636627_95637271
Length = 645
Score = 449 bits (232), Expect = e-131
Identities = 241/244 (98%)
Strand = Plus / Minus
Query: 1 gattaacattcccaccctggggccacagggattgagggtgattaaagcccgccttaagcc 60
||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||
Sbjct: 444 gattaacattcccaccctggggccacagggattgagggtgattaaagtctgccttaagcc 385
Query: 61 cactaaagccccaaatccacagcttacactaattctctcattcactccccaaaggcattt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 cactaaagccccaaatccacagcttacactaattctctcattcactccccaaaggcattt 325
Query: 121 tccacactagagcctgaaagccagaagcaggggggtcttctccgtctctcctgccttccc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 tccacactagagcctgaaagccagaagcaggggggtcttctccgtctctcctgccttccc 265
Query: 181 tagttgctaacatatggaaacagccatttctgctcagggacagttctccccacccccgcc 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 gagttgctaacatatggaaacagccatttctgctcagggacagttctccccacccccgcc 205
Query: 241 cctc 244
||||
Sbjct: 204 cctc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 245
Length of database: 645
Length adjustment: 9
Effective length of query: 236
Effective length of database: 636
Effective search space: 150096
Effective search space used: 150096
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
