CTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCAGCAGGATATTAATAACGATTTATAGTTTTGGGAAGATGGATAATA
CTTCTTGGGGTTCATATTTTCCTAATGAAGGCGCATTGACTTTTACTTAT
ATTTGACTAGAGGTGTTACATAGCATTCTAAGAAGAAAACAAATTCATTC
CCTAGCAGAACATGACCAATAACCTGATCTTCATTCATCTCCTTCCTGCT
TGAGTCTTTCTCAAGAACTTCTCTGTGAGTCAGAATCCAACTATGCCAGA
AAGACATGTTCTGGTCAGAAAATGGCACAGATGTAAGCAGTGTTCCAGTC
AGCATATGTTGATATTTTTGTCCCCCCCCTCCAGAGATAGAAGGAGAGAG
ATGAAGGGAGAGGGAGAACCCCTTAATAAAAACACCACCTCCTGGGGGGG
AGGGATCCCAGATCCTCTCTTGACTTTGGCTACACCAGGATATTTGTCAC
TATGTCTGACCTGCCAGAGTATGGCCCAAGAGAGCATGAACGGACCATCC
TTCTGTGTTCTGACTCTTTCAGTTAGCCTCCCCTTGCAGATTGTATAATC
ATATCTATGTTTGCCCCCGCCCCTCAGACCCATTTTGATTTAGGCTCTCC
CGCTCTCGTTTAAATTTCTTTCTTCTTTAACCTTATTTTCTTGTTTACTC
CCTTTTTTTTTTTATTTTGTTCCTCGTCTATCTGTATCCGCTAAAAC

CGATGACXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXTTGGTTGAACATTGAGCAATATTT
TAATTAATAACCAGGAAACTTTAGAGTAGAAATCTCTGCAGCTGGAAAGC
CGTTCTGTCATGCCTTCCTAGGCAGAGAGCCTGCTGGGAAGGTGGATGTT
TCCCTAGCGGGGCTTGTGGAAAATCTTAAGAAATACTGAAGAAAGAGCAC
TGAAAAATTTCTCCTTACTTGTAGTAATGATGCCATTCAGACAGTTTGAG
CTACTTGCCCTTACCCAGGCCATCCTTAAAGTCCCTCCGCAGCTGTTGCC
AGGAGAGGCTCGGGGTGAAATACATAACAAAGCGAAGCACAGTGCCACTT
TGGCAGAGAGCAGGACTGCGAGCCTGGAATGGATGTTTCCATCCTTGTGG
AGTGTTGAAGTTTTACCCCTGCATTCTAACTGAAGCAGGTATGGAAACAA
ATATGGTTGTGGGGAAAACACATTGCCTAACACAAGCAAGGGGAAGGATG
TTAGTGAATGGTGGAGAACAAAAGATGACTATTCGGACACTGCAAATAAT
ATCTCTGACTTGATTCCAGATAAGGAAAATATGTGTCATTCAGTCCAGTC
ACACACACACACTCTCATATTCTTTCTCCTTTTCATACTCACTCTTAACT
GTGCAGATTCCTCATCCACCCCTCCCTATTGAGTGGCCAGTCA

Query= MSMg01no309_h06.b1 MSMg01no309_h06.b1 CHROMAT_FILE:
MSMg01no309_h06.b1 PHD_FILE: MSMg01no309_h06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:51:02 2005
         (318 letters)



>mm_chr13_20421384_20422101
          Length = 718

 Score =  572 bits (296), Expect = e-168
 Identities = 308/312 (98%)
 Strand = Plus / Minus

                                                                       
Query: 4   ggaattcagcaggatattaataacgatttatagttttgggaagatggataatacttcttg 63
           ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 515 ggaattcagcaggatattaataacgatttatagttttgggaagatagataatacttcttg 456

                                                                       
Query: 64  gggttcatattttcctaatgaaggcgcattgacttttacttatatttgactagaggtgtt 123
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 gggttcatattttcctaatgaaggcgcattgacttttacttatatttgactagaggtgtt 396

                                                                       
Query: 124 acatagcattctaagaagaaaacaaattcattccctagcagaacatgaccaataacctga 183
           |||| ||||||||| |||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 395 acatggcattctaacaagaaaacaaatccattccctagcagaacatgaccaataacctga 336

                                                                       
Query: 184 tcttcattcatctccttcctgcttgagtctttctcaagaacttctctgtgagtcagaatc 243
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 335 tcttcattcatctccttcctgcttgagtctttctcaagaacttctctgtgagtcagaatc 276

                                                                       
Query: 244 caactatgccagaaagacatgttctggtcagaaaatggcacagatgtaagcagtgttcca 303
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 275 caactatgccagaaagacatgttctggtcagaaaatggcacagatgtaagcagtgttcca 216

                       
Query: 304 gtcagcatatgt 315
           ||||||||||||
Sbjct: 215 gtcagcatatgt 204


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 318
Length of database: 718
Length adjustment: 9
Effective length of query: 309
Effective length of database: 709
Effective search space:   219081
Effective search space used:   219081
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

Query= MSMg01no309_h06.g1 MSMg01no309_h06.g1 CHROMAT_FILE:
MSMg01no309_h06.g1 PHD_FILE: MSMg01no309_h06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:51:02 2005
         (505 letters)



>mm_chr13_20346541_20347445
          Length = 905

 Score =  930 bits (481), Expect = 0.0
 Identities = 499/505 (98%)
 Strand = Plus / Plus

                                                                       
Query: 1   ttggttgaacattgagcaatattttaattaataaccaggaaactttagagtagaaatctc 60
           ||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 201 ttggttggacattgagcaatattttaattaataaccaggaaactttggagtagaaatctc 260

                                                                       
Query: 61  tgcagctggaaagccgttctgtcatgccttcctaggcagagagcctgctgggaaggtgga 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgcagctggaaagccgttctgtcatgccttcctaggcagagagcctgctgggaaggtgga 320

                                                                       
Query: 121 tgtttccctagcggggcttgtggaaaatcttaagaaatactgaagaaagagcactgaaaa 180
           |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 321 tgtttccctagcggggcttgtggaaaatcttaagaagtactgaagaaagagcactgaaaa 380

                                                                       
Query: 181 atttctccttacttgtagtaatgatgccattcagacagtttgagctacttgcccttaccc 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 atttctccttacttgtagtaatgatgccattcagacagtttgagctacttgcccttaccc 440

                                                                       
Query: 241 aggccatccttaaagtccctccgcagctgttgccaggagaggctcggggtgaaatacata 300
           ||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 agggcttccttaaagtccctccgcagctgttgccaggagaggctcggggtgaaatacata 500

                                                                       
Query: 301 acaaagcgaagcacagtgccactttggcagagagcaggactgcgagcctggaatggatgt 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 acaaagcgaagcacagtgccactttggcagagagcaggactgcgagcctggaatggatgt 560

                                                                       
Query: 361 ttccatccttgtggagtgttgaagttttacccctgcattctaactgaagcaggtatggaa 420
           ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 561 ttccatccttgtggagtgttgaaattttacccctgcattctaactgaagcaggtatggaa 620

                                                                       
Query: 421 acaaatatggttgtggggaaaacacattgcctaacacaagcaaggggaaggatgttagtg 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 acaaatatggttgtggggaaaacacattgcctaacacaagcaaggggaaggatgttagtg 680

                                    
Query: 481 aatggtggagaacaaaagatgacta 505
           |||||||||||||||||||||||||
Sbjct: 681 aatggtggagaacaaaagatgacta 705


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 505
Length of database: 905
Length adjustment: 10
Effective length of query: 495
Effective length of database: 895
Effective search space:   443025
Effective search space used:   443025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)