Query= MSMg01no315_o15.b1 MSMg01no315_o15.b1 CHROMAT_FILE:
MSMg01no315_o15.b1 PHD_FILE: MSMg01no315_o15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:57:31 2005
(689 letters)
>mm_chr13_26182196_26183284
Length = 1089
Score = 1224 bits (633), Expect = 0.0
Identities = 672/689 (97%), Gaps = 8/689 (1%)
Strand = Plus / Minus
Query: 5 gaattctatttcagctctaaagttgctttatagagccactatacgacttatacaagtact 64
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 889 gaattctatttcagctgtaaagttgctttatagagccactatacgacttatacaagtact 830
Query: 65 ccaggtggtaacacagtcaaatgtaaggcgagttccaattttattttattagtatacttt 124
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 829 ccaggtggtaacacagtcaaatgtaaggcgagttccaatttgattttattagtatacttt 770
Query: 125 acaattctacagatacacaagcttcatagctcataaacaccaaggtcttgaagactttac 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 769 acaattctacagatacacaagcttcatagctcataaacaccaaggtcttgaagactttac 710
Query: 185 ctttctataaagtgccttttggaaaaggctactgcctccaatctgtaaatatattgctac 244
||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
Sbjct: 709 cttcctataaagtgccttttggagaaggctactgcctccaatctgtaaatatattgcttc 650
Query: 245 ccttgagggagtgcagatttatctcttctcaatttataagcaaatcccctgttaacctat 304
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 649 ccttgagggagtccagatttatctcttctcaatttataagcaaatcccctgttaacctat 590
Query: 305 ctcacctcttcaccaataatgagctggtttatgattgatagctagtgagtccactggagg 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 589 ctcacctcttcaccaataatgagctggtttatgattgatagctagtgagtccactggagg 530
Query: 365 caattgcacccccc----gttaagaaaataatgaagggaggagctaataaattcagcact 420
|||||||| | ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 529 caattgca----actaaagttaagaaaataatgaagggaggagctaataaattcagcact 474
Query: 421 gtttagtggatgaaatgaaatcaactttatagtgcacagctcccatggtgaacaaagaac 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 473 gtttagtggatgaaatgaaatcaactttatagtgcacagctcccatggtgaacaaagaac 414
Query: 481 tgatggtttcatgtgatatgtcagtgatgacaataggatgcaagctagaaattattcctt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 413 tgatggtttcatgtgatatgtcagtgatgacaataggatgcaagctagaaattattcctt 354
Query: 541 caatccagtactgcaaagctgtttccccagcagtcccagtgaattcctgctgataaatag 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 353 caatccagtactgcaaagctgtttccccagcagtcccagtgaattcctgctgataaatag 294
Query: 601 ttacgtgttcatccttgttttagtttctttcaatatttttactcacattaagtgtgttac 660
||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 293 ttatgtgttcatcattgttttagtttctttcaatatttttactcacattaagtgtgttac 234
Query: 661 tgttatattttaattgcacttagtactca 689
|||||||||||||||||||||||||||||
Sbjct: 233 tgttatattttaattgcacttagtactca 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 689
Length of database: 1089
Length adjustment: 10
Effective length of query: 679
Effective length of database: 1079
Effective search space: 732641
Effective search space used: 732641
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no315_o15.g1 MSMg01no315_o15.g1 CHROMAT_FILE:
MSMg01no315_o15.g1 PHD_FILE: MSMg01no315_o15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:57:32 2005
(344 letters)
>mm_chr13_26006793_26007536
Length = 744
Score = 596 bits (308), Expect = e-175
Identities = 334/344 (97%), Gaps = 4/344 (1%)
Strand = Plus / Plus
Query: 1 ctttaggggttctgagtgctcagagaacatttgaacaagtaag--atggtgagtctgatt 58
|||||||||||||| |||||||||||||||||||||||||||| || ||| |||||||
Sbjct: 201 ctttaggggttctgggtgctcagagaacatttgaacaagtaagacat--tgaatctgatt 258
Query: 59 gtgtctgatgaatgtgatcttttttccagctattgtgtgtgtgttgcatatttgtgtgcg 118
|||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 259 gtgtttgatgaatgtgatcttttttctagctattgtgtgtgtgttgcatatttgtgtgcg 318
Query: 119 catgtgtatgtttgtgcgcatgtgtgtgaatacatgctaaagaacaggggaaaaacctca 178
||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||
Sbjct: 319 catgtgtatgtttgtgcacatgtgtgtgaatacatgttaaagaacaggggaaaaacctca 378
Query: 179 aaaattgttctggtgggtgacctctaccgtttaaaaatatgtttcaaatattttcaaaca 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 aaaattgttctggtgggtgacctctaccgtttaaaaatatgtttcaaatattttcaaaca 438
Query: 239 acatattctgttgacattcttccctcaccccaagacctcttagatactcgcctcattcta 298
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 acatattctgttgacattcttccctcaccccaagacctcttagatactcgcctcattcta 498
Query: 299 ctatggacttcatgttctctatctcagaaaaaggaaggaatgaa 342
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 ctatggacttcatgttctctatctcagaaaaaggaaggaatgaa 542
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 344
Length of database: 744
Length adjustment: 9
Effective length of query: 335
Effective length of database: 735
Effective search space: 246225
Effective search space used: 246225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
