Query= MSMg01no315_p11.b1 MSMg01no315_p11.b1 CHROMAT_FILE:
MSMg01no315_p11.b1 PHD_FILE: MSMg01no315_p11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:57:36 2005
(674 letters)
>mm_chr13_54604082_54605154
Length = 1073
Score = 1251 bits (647), Expect = 0.0
Identities = 665/671 (99%), Gaps = 1/671 (0%)
Strand = Plus / Plus
Query: 4 gaattcactacttatcccctatttccctctgatggggatacaattttatccctatatttt 63
|||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 gaattcactactta-cccatatttccctctgatggggatacaattttatccctatatttt 262
Query: 64 ctgcttgctcacagcattggagtatacgggcactctgggacctcatagctctctgtatgt 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 ctgcttgctcacagcattggagtatacgggcactctgggacctcatagctctctgtatgt 322
Query: 124 gccttttcagtggtttccgtcaactagaaactcaacaaactcttacatctgacagtttaa 183
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 gccttttcagtggtttctgtcaactagaaactcaacaaactcttacatctgacagtttaa 382
Query: 184 attcctgtgacacgtattgttggtgaaaccgcaaatcggcacaacttaagacaatttggt 243
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 attcctgcgacacgtattgttggtgaaaccgcaaatcggcacaacttaagacaatttggt 442
Query: 244 accatttgtcaaaataacaataaaaacatagatttgatccaataaacctgcttctgggaa 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 accatttgtcaaaataacaataaaaacatagatttgatccaataaacctgcttctgggaa 502
Query: 304 tttatcccacggatttacctgcacacacaagagtgggtatctctcccttatctcagccag 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 tttatcccacggatttacctgcacacacaagagtgggtatctctcccttatctcagccag 562
Query: 364 aagccccagccaacaaaaccctaggttcaggttacccttttcagcccctcagggcttctt 423
||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 aagccccagtcaataaaaccctaggttcaggttacccttttcagcccctcagggcttctt 622
Query: 424 taacccgaaggcgtcactgctccttctgccaggtgcaggctccactaccgggtcaattaa 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 623 taacccgaaggcgtcactgctccttctgccaggtgcaggctccactaccgggtcaattaa 682
Query: 484 atgcgctatcagaggctccatcagctcactccagtcctcacacctgcagccaggggctcg 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 683 atgcgctatcagaggctccatcagctcactccagtcctcacacctgcagccaggggctcg 742
Query: 544 tcaccagcactgcccactgtgatcggttgagagcggcggcggacaacctctcaacctcag 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 743 tcaccagcactgcccactgtgatcggttgagagcggcggcggacaacctctcaacctcag 802
Query: 604 cgtttttcaagcccgccgaccatgcggcccagcccctcggttctatccctccctttccct 663
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 803 cgtttttcaagcccgccgaccatgcggcccagcccctcggttctatccctccctttccct 862
Query: 664 ctcttccctct 674
|||||||||||
Sbjct: 863 ctcttccctct 873
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 674
Length of database: 1073
Length adjustment: 10
Effective length of query: 664
Effective length of database: 1063
Effective search space: 705832
Effective search space used: 705832
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no315_p11.g1 MSMg01no315_p11.g1 CHROMAT_FILE:
MSMg01no315_p11.g1 PHD_FILE: MSMg01no315_p11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:57:36 2005
(335 letters)
>mm_chr13_54733553_54734287
Length = 735
Score = 632 bits (327), Expect = 0.0
Identities = 333/335 (99%)
Strand = Plus / Minus
Query: 1 actctgtagaccaggctggcctcgaactcagaaatccacctgcctctgcctcctgagcgc 60
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 559 actctgtagaccaggctggcctcgaactcagaaatccgcctgcctctgcctcctgagcgc 500
Query: 61 tgggatcaaaggcgtgcaccaccgccaggcttaaattctgatacttgacaacagggaggc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 tgggatcaaaggcgtgcaccaccgccaggcttaaattctgatacttgacaacagggaggc 440
Query: 121 agagctaaaagtgaaagctagaacaacttccagtgtccaggctcttatgaagcaacgcct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 agagctaaaagtgaaagctagaacaacttccagtgtccaggctcttatgaagcaacgcct 380
Query: 181 cctattatttgaaaaactcacaattgaaaacaaggtccaaattcttaaatcagaaaattt 240
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 379 cctattatttgaaaaactcacaattgaaaacaaggtcccaattcttaaatcagaaaattt 320
Query: 241 aaacgtttattgaaacctcggtaatttggctgggtggtattgacataaacctttaattcc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 aaacgtttattgaaacctcggtaatttggctgggtggtattgacataaacctttaattcc 260
Query: 301 aacaggcagaagcaggtggatctgagttcaaggcc 335
|||||||||||||||||||||||||||||||||||
Sbjct: 259 aacaggcagaagcaggtggatctgagttcaaggcc 225
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 335
Length of database: 735
Length adjustment: 9
Effective length of query: 326
Effective length of database: 726
Effective search space: 236676
Effective search space used: 236676
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
