Query= MSMg01no316_f10.b1 MSMg01no316_f10.b1 CHROMAT_FILE:
MSMg01no316_f10.b1 PHD_FILE: MSMg01no316_f10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:58:04 2005
(374 letters)
>mm_chr13_96488472_96489245
Length = 774
Score = 685 bits (354), Expect = 0.0
Identities = 370/376 (98%), Gaps = 2/376 (0%)
Strand = Plus / Minus
Query: 1 caagtttgaggccagctcaggctacatgagactatttcaatatgaaaatattacctatat 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 680 caagtttgaggccagctcaggctacatgagactatttcaatatgaaaatattacatatat 621
Query: 61 ctgtatgagtatgtgtgtgtatatatatgtataatttatacaattacacacacacacaca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 ctgtatgagtatgtgtgtgtatatatatgtataatttatacaattacacacacacacaca 561
Query: 121 cacaccaccaccaccaccaccactaccatcaccactaccaacattaacaacaataacagc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 cacaccaccaccaccaccaccactaccatcaccactaccaacattaacaacaataacagc 501
Query: 181 aaagaagaacagtcttgttttagtgcatagttgaacccctctggtccaaatccaagtggc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 aaagaagaacagtcttgttttagtgcatagttgaacccctctggtccaaatccaagtggc 441
Query: 241 atcatggttttagacttctatgggatatataacagaggggccagcaggcccagtgttgtt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 atcatggttttagacttctatgggatatataacagaggggccagcaggcccagtgttgtt 381
Query: 301 agtgctggcctggctgaagc--atatatatatatatatatatatatacacacatatataa 358
|||||||||||||||||||| ||||||||||||||||||||||||| | | ||||||||
Sbjct: 380 agtgctggcctggctgaagcatatatatatatatatatatatatatatatatatatataa 321
Query: 359 atgtatatttatgtgt 374
||||||||||||||||
Sbjct: 320 atgtatatttatgtgt 305
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 96
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 374
Length of database: 774
Length adjustment: 9
Effective length of query: 365
Effective length of database: 765
Effective search space: 279225
Effective search space used: 279225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no316_f10.g1 MSMg01no316_f10.g1 CHROMAT_FILE:
MSMg01no316_f10.g1 PHD_FILE: MSMg01no316_f10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:58:04 2005
(288 letters)
>mm_chr13_96316151_96316838
Length = 688
Score = 501 bits (259), Expect = e-146
Identities = 280/287 (97%)
Strand = Plus / Plus
Query: 1 cacttacattgggcaaaagccagaaacctgctgaaaccttatttaccccgagtactgatc 60
||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||
Sbjct: 201 cacttacattgggcaaaagccagaaacctgctgaaaccttaaaaacccggagtactgatc 260
Query: 61 cacaggcattccctctccaggtgctctctgcctaagcaaacgtcagtacacgcttgcttg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cacaggcattccctctccaggtgctctctgcctaagcaaacgtcagtacacgcttgcttg 320
Query: 121 gtaaaggaagatcagcctttcccacggttgccttttagacaccagttgtgtctcacacag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gtaaaggaagatcagcctttcccacggttgccttttagacaccagttgtgtctcacacag 380
Query: 181 tggcaaacccaggcagggggtgtgggggctggaaggccttatacagcttgagagaattaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tggcaaacccaggcagggggtgtgggggctggaaggccttatacagcttgagagaattaa 440
Query: 241 tactgattagactatcaaaaatgttctcttgacaaacccctttctgt 287
||| || |||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tacagaggagactatcaaaaatgttctcttgacaaacccctttctgt 487
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 288
Length of database: 688
Length adjustment: 9
Effective length of query: 279
Effective length of database: 679
Effective search space: 189441
Effective search space used: 189441
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
