Query= MSMg01no320_l10.b1 MSMg01no320_l10.b1 CHROMAT_FILE:
MSMg01no320_l10.b1 PHD_FILE: MSMg01no320_l10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:03:17 2005
(311 letters)
>mm_chr13_89883248_89883957
Length = 710
Score = 563 bits (291), Expect = e-165
Identities = 303/307 (98%), Gaps = 1/307 (0%)
Strand = Plus / Minus
Query: 5 gaattcctattgattcaagagctgtgttctgataagcatctctggtctgtgcaagcttgg 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 510 gaattcctattgattcaagagctgtgttctgataagcatctctggtctgtgcaagcttgg 451
Query: 65 ggtgtgtctctcttccatacctggttgtgttggcatgttaaatgcagtgactgaagtctg 124
|||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 450 ggtgagtctct-ttccatacctggttgtgttggcatgttaaatgcagtgactgaagtctg 392
Query: 125 atgtcaagatgtggctctcattctacacaatatatgggatgaaatttcagttttagtaat 184
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 391 atgtcaagatgtggctctcattctgcacaatatatgggatgaaatttcagttttagtaat 332
Query: 185 ggcagtacaatcgtcgcataaaggttaaataagtcactgtaagccaaactgatttcgaaa 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 331 ggcagtacaatcgtcgcataaaggttaaataagtcactgtaagccaaactgatttcgaaa 272
Query: 245 tggcccgtagtacagttaagtcactcactactgtgagtgtaagtaaaaggacacatgaaa 304
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 271 tggcccgtagtacagttaagtcactcactacagtgagtgtaagtaaaaggacacatgaaa 212
Query: 305 tacacac 311
|||||||
Sbjct: 211 tacacac 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 311
Length of database: 710
Length adjustment: 9
Effective length of query: 302
Effective length of database: 701
Effective search space: 211702
Effective search space used: 211702
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no320_l10.g1 MSMg01no320_l10.g1 CHROMAT_FILE:
MSMg01no320_l10.g1 PHD_FILE: MSMg01no320_l10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:03:17 2005
(286 letters)
>mm_chr13_89696692_89697377
Length = 686
Score = 487 bits (252), Expect = e-142
Identities = 278/290 (95%), Gaps = 8/290 (2%)
Strand = Plus / Plus
Query: 1 cagatggacaattcttttcttttgctggtttaaa---aaacaaacaaacaaaaaac-aaa 56
|||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||
Sbjct: 193 cagatggacaattcttttcttttgctggtttaaaaacaaacaaacaaacaaaaaacaaaa 252
Query: 57 aacaaacaaaaa----aaaaaaaaaaacccaaaaaacaaaaaaccactctccactttcat 112
|||||| ||||| |||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 253 aacaaaaaaaaacaacaaaaaaaaaaacaaaaaaaacaaaaaaccactctccactttcat 312
Query: 113 cttacttgttttgcttcaggtaagaaatctgccttcatccctactgctttataaagttat 172
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 cttacttgttttgcttcaggtaagaaatctgccttcatccctactgctttataaagttat 372
Query: 173 atcaactctattgtttgcttcacattctctcttcaaagttcttttttcttttgaaagttt 232
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 373 atcaactctattgtttgcttcacattctctcttcagagttcttttttcttttgaaagttt 432
Query: 233 caattattatgtcctgtggctaaattttcttagtatttgagatttcctaa 282
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 caattattatgtcctgtggctaaattttcttagtatttgagatttcctaa 482
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 286
Length of database: 686
Length adjustment: 9
Effective length of query: 277
Effective length of database: 677
Effective search space: 187529
Effective search space used: 187529
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
