Query= MSMg01no320_p02.b1 MSMg01no320_p02.b1 CHROMAT_FILE:
MSMg01no320_p02.b1 PHD_FILE: MSMg01no320_p02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:03:34 2005
(389 letters)
>mm_chr13_10008216_10009004
Length = 789
Score = 714 bits (369), Expect = 0.0
Identities = 384/389 (98%)
Strand = Plus / Plus
Query: 1 ttttgtgagcaatggggtactttataattgtattgatgggacaaaatactagagaagcca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttttgtgagcaatggggtactttataattgtattgatgggacaaaatactagagaagcca 260
Query: 61 agtaattatccaagattctaacagcaaataaaacagcagagttccagtacaaccaatttc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agtaattatccaagattctaacagcaaataaaacagcagagttccagtacaaccaatttc 320
Query: 121 attattccttttctagtctttctagatttgatcatcccaatttgatcattttcagggtgg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 attattccttttctagtctttctagatttgatcatcccaatttgatcattttcagggtgg 380
Query: 181 ttaagtaatacaggcataaaccaaatttctgttgatcagactctttttctatctttcatt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttaagtaatacaggcataaaccaaatttctgttgatcagactctttttctatctttcatt 440
Query: 241 ctaacgacagctctgtgaattactgaacaatgtacaggttcttttaatggaggcagggag 300
|||| || | |||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 441 ctaatgagacctctgtgaattactgaacaatgtagaggttcttttaatggaggcagggag 500
Query: 301 ataaggatccacattggcttgccccacgccttggaatttaggcctgtttcaaccaaggat 360
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 501 ataaggatccacattggcttgccccacgccttggaatttaggcctatttcaaccaaggat 560
Query: 361 ctacatttcatttttcctgactcatgatg 389
|||||||||||||||||||||||||||||
Sbjct: 561 ctacatttcatttttcctgactcatgatg 589
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 389
Length of database: 789
Length adjustment: 9
Effective length of query: 380
Effective length of database: 780
Effective search space: 296400
Effective search space used: 296400
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no320_p02.g1 MSMg01no320_p02.g1 CHROMAT_FILE:
MSMg01no320_p02.g1 PHD_FILE: MSMg01no320_p02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:03:34 2005
(233 letters)
>mm_chr13_10167103_10167734
Length = 632
Score = 397 bits (205), Expect = e-115
Identities = 223/229 (97%), Gaps = 1/229 (0%)
Strand = Plus / Minus
Query: 1 gacagaagcttatgggccatcttgcttggctgatacagcgacaaaagtaacaagagagat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 gacagaagcttatgggccatcttgcttggctgatacagcgacaaaagtaacaagagagat 369
Query: 61 ctgcctccaaacaacatgaaagctcaaggaccaaatggcaaaaactgtgctcttgcctct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 ctgcctccaaacaacatgaaagctcaaggaccaaatggcaaaaactgtgctcttgcctct 309
Query: 121 agacatgtaaaccacagcaagtttgcaccagcattgacatacatatatacctacatgtct 180
|||||||||||||||||||||| ||||||||||||||||| ||| |||||||||||||||
Sbjct: 308 agacatgtaaaccacagcaagtgtgcaccagcattgacatgcatgtatacctacatgtct 249
Query: 181 tcacacttatttaccccaatgcatacccccaaaacaaagtaaattaata 229
||||||||| ||||||| ||||||||||||||||||||||||||||||
Sbjct: 248 tcacacttacctacccca-tgcatacccccaaaacaaagtaaattaata 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 233
Length of database: 632
Length adjustment: 9
Effective length of query: 224
Effective length of database: 623
Effective search space: 139552
Effective search space used: 139552
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
